G57564


Basic Information

Item Value
gene id G57564
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 11386354 ~ 11386583 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU65582
AACACTCTTGAGCACCTGTGGGGGATTCTGTAGAGACGAGTTGAGCAACACTCCCCATTAAAGATCAGGGCATTTAAGGAGCTCATCATCCAGGAGTTAAACAGGACAGATGTGACAATTTGTCATGAACTTGTACACTCTGTGCCAAGAAGGGTCAGAGCAGTATATTCAAAATTATGGAGGGCATACTAAGTACTAGAATATTATACATTTGTTGAATTAAATCTAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65582 True 230 lncRNA 0.40 1 11386354 11386583

Neighbor

gene id symbol gene type direction distance location
CI01000009_11342784_11347580 NA coding upstream 37527 11342784 ~ 11348827 (+)
CI01000009_10644080_10691030 CPS1 coding upstream 694304 10644080 ~ 10692050 (+)
CI01000009_10583435_10617169 MAP2 coding upstream 769185 10583435 ~ 10617169 (+)
CI01000009_10555555_10560050 NA coding upstream 825956 10554350 ~ 10560398 (+)
CI01000009_10491868_10508777 NA coding upstream 877345 10491401 ~ 10509009 (+)
CI01000009_11434018_11455253 NA coding downstream 47209 11433792 ~ 11455635 (+)
CI01000009_11493236_11526914 VWC2L coding downstream 106653 11493236 ~ 11526914 (+)
CI01000009_11669960_11702667 HIBCH coding downstream 283377 11669960 ~ 11703539 (+)
CI01000009_11711277_11714191 MSTN, GDF-8, MSTNB coding downstream 324577 11711160 ~ 11714694 (+)
CI01000009_11761868_11765848 ORMDL1.S, ORMDL1 coding downstream 375023 11761606 ~ 11766944 (+)
G57557 NA non-coding upstream 14586 11371395 ~ 11371768 (+)
G57556 NA non-coding upstream 15882 11369988 ~ 11370472 (+)
G56784 NA non-coding upstream 129384 10985244 ~ 11256970 (+)
G56843 NA non-coding upstream 271691 11111237 ~ 11114663 (+)
G56744 NA non-coding upstream 453595 10919860 ~ 10932759 (+)
G57567 NA non-coding downstream 10420 11397003 ~ 11397339 (+)
G57589 NA non-coding downstream 44761 11431344 ~ 11431637 (+)
G57615 NA non-coding downstream 77342 11463925 ~ 11464220 (+)
G57616 NA non-coding downstream 78066 11464649 ~ 11464858 (+)
G57618 NA non-coding downstream 80682 11467265 ~ 11467524 (+)
CI01000009_09853929_09854476 SAP18 other upstream 1529767 9853929 ~ 9856587 (+)
G56100 NA other upstream 2256068 9129300 ~ 9130286 (+)
G53651 NA other upstream 5137962 6245564 ~ 6248392 (+)
CI01000009_05931829_05943829 KCNH3 other upstream 5453553 5931718 ~ 5943899 (+)
G53388 NA other upstream 5847300 5522242 ~ 5540638 (+)
G57811 NA other downstream 547359 11933942 ~ 11935251 (+)
CI01000009_12432736_12435509 NA other downstream 1045975 12432538 ~ 12436017 (+)
G57682 NA other downstream 1438886 12825469 ~ 12892339 (+)
G57691 NA other downstream 1519861 12906444 ~ 12918465 (+)

Expression


Co-expression Network