G57567


Basic Information

Item Value
gene id G57567
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 11397003 ~ 11397339 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU65585
CAGAAAAACACAGAATTGTTGACATTTTTGCAGATTTATTAAAAAAGAAAAACTGAAATATCACATGGTCCTAAGTATTCAGACCCTTTGCTGTGACACTCATATATTTAACTCAGGTGCTGTTCATTTCTTCTGATCATCCTCGAGATGGTTCTACACCTTCATTTGAGTCCAGCTGTGTTTGATTATACTGATTGGACTTGATTAGGAAAGCCACACACCTGTCTATATAAGACCTTACAGCTCACAGTGCATGTCAGAGCAAATGAGAATCATGAGGTCAAAGGAACTGCCTGAAGAGCTCAGAGACAGAATTGTGGCAAGGCACAGATCTGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65585 True 337 lncRNA 0.40 1 11397003 11397339

Neighbor

gene id symbol gene type direction distance location
CI01000009_11342784_11347580 NA coding upstream 48176 11342784 ~ 11348827 (+)
CI01000009_10644080_10691030 CPS1 coding upstream 704953 10644080 ~ 10692050 (+)
CI01000009_10583435_10617169 MAP2 coding upstream 779834 10583435 ~ 10617169 (+)
CI01000009_10555555_10560050 NA coding upstream 836605 10554350 ~ 10560398 (+)
CI01000009_10491868_10508777 NA coding upstream 887994 10491401 ~ 10509009 (+)
CI01000009_11434018_11455253 NA coding downstream 36453 11433792 ~ 11455635 (+)
CI01000009_11493236_11526914 VWC2L coding downstream 95897 11493236 ~ 11526914 (+)
CI01000009_11669960_11702667 HIBCH coding downstream 272621 11669960 ~ 11703539 (+)
CI01000009_11711277_11714191 MSTN, GDF-8, MSTNB coding downstream 313821 11711160 ~ 11714694 (+)
CI01000009_11761868_11765848 ORMDL1.S, ORMDL1 coding downstream 364267 11761606 ~ 11766944 (+)
G57564 NA non-coding upstream 10420 11386354 ~ 11386583 (+)
G57557 NA non-coding upstream 25235 11371395 ~ 11371768 (+)
G57556 NA non-coding upstream 26531 11369988 ~ 11370472 (+)
G56784 NA non-coding upstream 140033 10985244 ~ 11256970 (+)
G56843 NA non-coding upstream 282340 11111237 ~ 11114663 (+)
G57589 NA non-coding downstream 34005 11431344 ~ 11431637 (+)
G57615 NA non-coding downstream 66586 11463925 ~ 11464220 (+)
G57616 NA non-coding downstream 67310 11464649 ~ 11464858 (+)
G57618 NA non-coding downstream 69926 11467265 ~ 11467524 (+)
G57626 NA non-coding downstream 115563 11512902 ~ 11513204 (+)
CI01000009_09853929_09854476 SAP18 other upstream 1540416 9853929 ~ 9856587 (+)
G56100 NA other upstream 2266717 9129300 ~ 9130286 (+)
G53651 NA other upstream 5148611 6245564 ~ 6248392 (+)
CI01000009_05931829_05943829 KCNH3 other upstream 5464202 5931718 ~ 5943899 (+)
G53388 NA other upstream 5857949 5522242 ~ 5540638 (+)
G57811 NA other downstream 536603 11933942 ~ 11935251 (+)
CI01000009_12432736_12435509 NA other downstream 1035219 12432538 ~ 12436017 (+)
G57682 NA other downstream 1428130 12825469 ~ 12892339 (+)
G57691 NA other downstream 1509105 12906444 ~ 12918465 (+)

Expression


Co-expression Network