G22834


Basic Information

Item Value
gene id G22834
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 31494345 ~ 31494898 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU30785
catacagagaggaggtgcagcggctgacagactggtgtacagtcaacaaccttcacctgaatgtggacaagacaaaggaaatggttgttgacttcaggagagcacaacacacccactctccactcaacatcgacgggtcctctgtggagattgttaagagcaccaagttccttggtgtccacttagcagataacctcacctggaccctgaacaccagctctacagccaagaaagcccagcagcgtctctacttcctccggaagctgagaaaggcccgtctccctccacccatcctcacactcttctatagagggaccattgagagcatcctgagcagctgcatcactgcctggtttgggacctgcaccgtctctgaccgcaagaccctccagcgtattgtgaggacagctgagaggatcatcggcgtctctctcccctccatcacggacatttacaccacccgcagcatccgcaaagcaaccagcattgtgaatgaccccactcatccctcacacaaactgttctccctcctgcctttgggaagaaggtaccgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU30785 True 554 TUCP 0.62 1 31494345 31494898

Neighbor

gene id symbol gene type direction distance location
LOC103025325 NA coding upstream 60132 31427579 ~ 31434213 (+)
rhag rhag,LOC107549521,LOC107695981 coding upstream 76228 31398412 ~ 31418117 (+)
c3h12orf57 grcc10,clg18h12orf57,cssa15h12orf57,c25h12orf57,c7h12orf57,LOC103027128,LOC107695984,LOC105901913 coding upstream 313231 31175441 ~ 31181114 (+)
LOC103028275 ppp1cb,LOC107583611,LOC108426284,LOC107582864 coding upstream 331697 31150426 ~ 31162648 (+)
plb1 NA coding upstream 345168 31121395 ~ 31149177 (+)
dtl dtl coding downstream 103786 31598684 ~ 31608806 (+)
ppp2r5a ppp2r5a coding downstream 117615 31612513 ~ 31658213 (+)
LOC103022697 NA coding downstream 170204 31665102 ~ 31691430 (+)
rnf8 rnf8 coding downstream 212156 31707054 ~ 31713807 (+)
tcte1 NA coding downstream 228107 31723005 ~ 31728361 (+)
G22822 slc30a1 non-coding upstream 14174 31395732 ~ 31480171 (+)
G22754 bpnt1,LOC107549527 non-coding upstream 322543 31164383 ~ 31171802 (+)
G22747 NA non-coding upstream 385396 31108655 ~ 31108949 (+)
G22743 NA non-coding upstream 396516 31090989 ~ 31097829 (+)
G22641 NA non-coding upstream 854271 30638826 ~ 30640074 (+)
G22835 nek2,LOC107549520,LOC106571199,LOC107695968 non-coding downstream 5117 31500015 ~ 31505351 (+)
G22837 NA non-coding downstream 12552 31507450 ~ 31507909 (+)
G22844 NA non-coding downstream 52294 31547192 ~ 31547517 (+)
G22845 NA non-coding downstream 52852 31547750 ~ 31548100 (+)
G22937 hsp90ab1,LOC106942468,LOC102219317 non-coding downstream 294774 31789672 ~ 31792894 (+)
LOC103026436 LOC108411506,LOC103368653 other upstream 981519 30449364 ~ 30512826 (+)
LOC111195794 LOC107569315,LOC107712034,LOC107751710 other upstream 1230495 30259308 ~ 30263850 (+)
LOC103034207 ube2w,LOC107585923,LOC103354920 other upstream 2312214 29171008 ~ 29182131 (+)
pabpn1 pabpn1,LOC107596039 other upstream 2326432 29152052 ~ 29167913 (+)
G22276 NA other upstream 2505514 28988568 ~ 28988831 (+)
G23086 cpsf2,LOC107704064,LOC107548411,LOC107559080,LOC107669458 other downstream 1327446 32822344 ~ 32826939 (+)
LOC103042732 NA other downstream 1342154 32837052 ~ 32841346 (+)
LOC103037425 LOC108426312 other downstream 1581726 33076624 ~ 33081862 (+)
LOC103036694 LOC108426313,LOC108257731 other downstream 1588744 33083642 ~ 33169392 (+)
LOC107197779 LOC107197779,LOC108426271,LOC106607680,LOC108257511 other downstream 2092631 33587529 ~ 33595711 (+)

Expression


Co-expression Network