G23253


Basic Information

Item Value
gene id G23253
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 33189961 ~ 33190715 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU31328
aaaaaagtggcctataatggaggtgggaggaataaagtcaagtttctgaaatgatccacttctactgcagtacagatttatactaacattactggctttcagtagactagacttacattacttaagtgtatttaaaactccagttcagtaacagcaatgtttagctcagttcaaatacagctagacagattatataatcttctgtatttagtaaaatatccagcataacagactctctatctgttaaaaactataaaacacaaagacagaggagaatgctgccctcagggttttctaacagaaacagtgagagttaggaaaaaagatggaaagtgcttcctttctgtgtgtttatatactaacccctcactcgtgctgaagttaaccttaatttacacgaaacgtggattaacacggctaacgtgcgttacccattagtttattagaatgtaaaaagcagtgaaagcatcttagctaatgatgacagattgcacagatcccttttacacctaaacatcgctaactttaaactggagacaagctaatctaactagcagcaaacagagcagcgtttacctgccttcagaaatctgaacaagctcacctctctaaatatcttggagacgcatgcctcatatttaaaaggtgagttttccagtgtagcgccgctgaatagtataaatgaagtttatccagtaaatgggagagaaggagccgctatgtgaggagttcagagtggaggggctcggggggtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU31328 True 755 lncRNA 0.39 1 33189961 33190715

Neighbor

gene id symbol gene type direction distance location
LOC103037759 tmem30ab,LOC107721815,LOC107658180,LOC107597847,LOC108257743,LOC107714749,LOC107581488 coding upstream 113821 33070811 ~ 33076140 (+)
filip1 filip1 coding upstream 122234 33016420 ~ 33067727 (+)
kif13b kif13b coding upstream 219942 32931610 ~ 32970019 (+)
extl3 extl3,LOC107745900,LOC107548434,LOC107704067,LOC107559127 coding upstream 299520 32854082 ~ 32890441 (+)
LOC103043556 LOC108426268,LOC108257619,LOC107548420,LOC107719437,LOC107669431,LOC107559097 coding upstream 498300 32591870 ~ 32691661 (+)
naa20 naa20 coding downstream 241208 33431923 ~ 33436804 (+)
cfap61 NA coding downstream 253687 33444402 ~ 33498321 (+)
insm1 NA coding downstream 317359 33508074 ~ 33511617 (+)
xrn2 xrn2,LOC107704080,LOC107669450,LOC107548427 coding downstream 434771 33625486 ~ 33649657 (+)
pax1 pax1,LOC103035152,LOC107564482,LOC107548404 coding downstream 485360 33676075 ~ 33681836 (+)
G23251 NA non-coding upstream 17247 33172369 ~ 33172714 (+)
G23116 NA non-coding upstream 295311 32894241 ~ 32894650 (+)
G23075 NA non-coding upstream 473516 32711872 ~ 32716445 (+)
G23062 NA non-coding upstream 642497 32525062 ~ 32547464 (+)
G23057 NA non-coding upstream 662237 32522014 ~ 32527724 (+)
G23255 NA non-coding downstream 16597 33207312 ~ 33207532 (+)
G23282 NA non-coding downstream 155097 33345812 ~ 33346060 (+)
G23286 NA non-coding downstream 162285 33353000 ~ 33353261 (+)
G23289 NA non-coding downstream 169665 33360380 ~ 33360599 (+)
LOC111195982 NA non-coding downstream 310522 33501237 ~ 33502351 (+)
LOC103036694 LOC108426313,LOC108257731 other upstream 20569 33083642 ~ 33169392 (+)
LOC103037425 LOC108426312 other upstream 108099 33076624 ~ 33081862 (+)
LOC103042732 NA other upstream 348615 32837052 ~ 32841346 (+)
G23086 cpsf2,LOC107704064,LOC107548411,LOC107559080,LOC107669458 other upstream 363022 32822344 ~ 32826939 (+)
G22834 NA other upstream 1695063 31494345 ~ 31494898 (+)
LOC107197779 LOC107197779,LOC108426271,LOC106607680,LOC108257511 other downstream 396814 33587529 ~ 33595711 (+)
cebpzos cebpzos other downstream 587227 33777942 ~ 33779903 (+)
cnksr3 cnksr3,LOC108426324,LOC108257645,LOC107560196 other downstream 703621 33894336 ~ 33964508 (+)
trdn NA other downstream 2036083 35226798 ~ 35302347 (+)
LOC103040783 LOC108411309 other downstream 2852716 36043431 ~ 36096726 (+)

Expression


Co-expression Network