G23866


Basic Information

Item Value
gene id G23866
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 35797712 ~ 35798076 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU32082
ACCACCTAATAAAATAACTCAGTCACTATCCCCTGTTTACCTAACTCAGTTACTAACACCCTTTCTCATTCACTAACTAATGCAGCTCTTTAATGGTTTGGCTCATGACTGTTTGTTAAAGAACTGTAATGTTAACCATACACTagttgaataaaaatagaaCATTCTGGATTGTGTCCTGTGGCTTCTGGGTTGCATTTCCTTGAAGCTGAGTTTGGCGTATCATCCGAAttatccgttccaccttaaatggtgggGCAGCTCCATTCGGCTGCTGATCGCATGGACAGCACGACGGGGGTTGAAAAATGAAGCCACTACGCCTCTAacgccctctggtggctggctGCAGTACAACTTTTAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU32082 True 365 lncRNA 0.44 1 35797712 35798076

Neighbor

gene id symbol gene type direction distance location
gab3 gab3,LOC107557096 coding upstream 121391 35638347 ~ 35676321 (+)
serinc1 serinc1,LOC107675227,LOC107598085,LOC107727646,LOC107675084 coding upstream 337373 35448642 ~ 35460339 (+)
hddc2 hddc2,LOC107580122 coding upstream 977392 34816867 ~ 34820320 (+)
esco2 NA coding upstream 1121770 34670238 ~ 34675942 (+)
scara3 scara3 coding upstream 1172117 34597882 ~ 34625595 (+)
LOC103040467 LOC108444278 coding downstream 9391 35807467 ~ 35810107 (+)
zc3h12b zc3h12b,LOC107557112,LOC107741193,LOC107597257,LOC107672716 coding downstream 25120 35823196 ~ 35850191 (+)
msn msn,moes,LOC108411308,LOC106567791 coding downstream 79117 35877193 ~ 35923957 (+)
LOC103037324 NA coding downstream 144019 35942095 ~ 35964597 (+)
yipf6 yipf6,LOC107596694,LOC107746343,LOC107757533 coding downstream 813187 36611263 ~ 36619989 (+)
G23860 mtmr8,LOC108444279,LOC107557116 non-coding upstream 95 35749948 ~ 35797617 (+)
G23862 amer1 non-coding upstream 27108 35763969 ~ 35770604 (+)
G23844 NA non-coding upstream 237390 35560087 ~ 35560322 (+)
G23842 NA non-coding upstream 253155 35544332 ~ 35544557 (+)
G23840 NA non-coding upstream 269553 35527928 ~ 35528159 (+)
G23869 NA non-coding downstream 23224 35821300 ~ 35821831 (+)
G23872 NA non-coding downstream 30356 35828432 ~ 35830702 (+)
G23876 las1l non-coding downstream 63126 35861202 ~ 35863662 (+)
G23929 NA non-coding downstream 126268 35924344 ~ 35924568 (+)
G23967 NA non-coding downstream 206565 36004641 ~ 36039409 (+)
trdn NA other upstream 495365 35226798 ~ 35302347 (+)
cnksr3 cnksr3,LOC108426324,LOC108257645,LOC107560196 other upstream 1833204 33894336 ~ 33964508 (+)
cebpzos cebpzos other upstream 2017809 33777942 ~ 33779903 (+)
LOC107197779 LOC107197779,LOC108426271,LOC106607680,LOC108257511 other upstream 2202001 33587529 ~ 33595711 (+)
LOC103036694 LOC108426313,LOC108257731 other upstream 2628320 33083642 ~ 33169392 (+)
LOC103040783 LOC108411309 other downstream 245355 36043431 ~ 36096726 (+)
ar ar,LOC108443198 other downstream 451748 36249824 ~ 36458929 (+)
LOC111194342 NA other downstream 1791030 37589106 ~ 37714382 (+)
G24345 cwc15,LOC107747811,LOC107597228,LOC107732607 other downstream 2130279 37928355 ~ 37933989 (+)
G24390 NA other downstream 2294898 38092974 ~ 38098324 (+)

Expression


Co-expression Network