G23872


Basic Information

Item Value
gene id G23872
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 35828432 ~ 35830702 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU32091
GCTCCTCTGTCCTGCTCTTGTTACCTGTATTAATGGCACCTGTTTGACCTTGCTATCTGTATAAGACACCTGTTCACAGCCTCAAACAGTCAGACTCCAAACTCAACCATGGCCAAGACCAAAGAGCTGTGGAAGGACACCAGGAAGAAAATTGTAGACCTGCACCAGGCTGGGAAGAGTAAATCCACAACAGGCAAGCATGTTGGTGTGAATAAATCTACTATTGGAGCAATTGTAAGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU32091 True 242 lncRNA 0.45 2 35828432 35830702

Neighbor

gene id symbol gene type direction distance location
LOC103040467 LOC108444278 coding upstream 18325 35807467 ~ 35810107 (+)
gab3 gab3,LOC107557096 coding upstream 152111 35638347 ~ 35676321 (+)
serinc1 serinc1,LOC107675227,LOC107598085,LOC107727646,LOC107675084 coding upstream 368093 35448642 ~ 35460339 (+)
hddc2 hddc2,LOC107580122 coding upstream 1008112 34816867 ~ 34820320 (+)
esco2 NA coding upstream 1152490 34670238 ~ 34675942 (+)
msn msn,moes,LOC108411308,LOC106567791 coding downstream 46491 35877193 ~ 35923957 (+)
LOC103037324 NA coding downstream 111393 35942095 ~ 35964597 (+)
yipf6 yipf6,LOC107596694,LOC107746343,LOC107757533 coding downstream 780561 36611263 ~ 36619989 (+)
LOC111191796 NA coding downstream 796066 36626768 ~ 36628605 (+)
stard8 stard8 coding downstream 842269 36672971 ~ 36796896 (+)
G23869 NA non-coding upstream 6601 35821300 ~ 35821831 (+)
G23866 NA non-coding upstream 30356 35797712 ~ 35798076 (+)
G23860 mtmr8,LOC108444279,LOC107557116 non-coding upstream 30815 35749948 ~ 35797617 (+)
G23862 amer1 non-coding upstream 57828 35763969 ~ 35770604 (+)
G23844 NA non-coding upstream 268110 35560087 ~ 35560322 (+)
G23876 las1l non-coding downstream 30500 35861202 ~ 35863662 (+)
G23929 NA non-coding downstream 93642 35924344 ~ 35924568 (+)
G23967 NA non-coding downstream 173939 36004641 ~ 36039409 (+)
G23968 NA non-coding downstream 184383 36015085 ~ 36038596 (+)
G23996 NA non-coding downstream 351444 36182146 ~ 36182496 (+)
trdn NA other upstream 526085 35226798 ~ 35302347 (+)
cnksr3 cnksr3,LOC108426324,LOC108257645,LOC107560196 other upstream 1863924 33894336 ~ 33964508 (+)
cebpzos cebpzos other upstream 2048529 33777942 ~ 33779903 (+)
LOC107197779 LOC107197779,LOC108426271,LOC106607680,LOC108257511 other upstream 2232721 33587529 ~ 33595711 (+)
LOC103036694 LOC108426313,LOC108257731 other upstream 2659040 33083642 ~ 33169392 (+)
LOC103040783 LOC108411309 other downstream 212729 36043431 ~ 36096726 (+)
ar ar,LOC108443198 other downstream 419122 36249824 ~ 36458929 (+)
LOC111194342 NA other downstream 1758404 37589106 ~ 37714382 (+)
G24345 cwc15,LOC107747811,LOC107597228,LOC107732607 other downstream 2097653 37928355 ~ 37933989 (+)
G24390 NA other downstream 2262272 38092974 ~ 38098324 (+)

Expression


Co-expression Network