ar (ar,LOC108443198)


Basic Information

Item Value
gene id ar
gene name ar,LOC108443198
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 36249824 ~ 36458929 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU32264
AAGGACCCATGGAAGCTGCAAGCAACACGAAAGCTAAAGAAGATCGGACAGCTGAAGGGTCCAGAGGAGGAGAGCGCAGCACCGGGCATGCCTCCTAGATTCTGTTCATCCGAATTGACTCCGATACCGTCACCTAAGCTGGGCCTGACTTTCCACTCCCAGCAAGTGTTCCTGGGTATTCTAGAGGCCATCGAGCCCGAGGTGGTAAATGCCGGACACGACCACTGTCAGCCTGACTCTGCTGCAGCTCTGCTGACCAGTCTCAACGAGCTCGGAGAGAGGCAGCTGGTCAAAGTGGTCAAATGGGCCAAAGGACTGCCAGGT
>XM_022685081.1
TAACAAATGTCAGATAGCACCAGTATGATGTTTACAGCCTTTATTGTAAGAGGTGATGCCTGTTATCTTCTGACAATCCCctattttacacaaattatCAAACAAATGTGAAATGTTCACACACTGAAAACAAGGTCTAAAACTGGGGTTACCTAACCAGTTTTCATTATATTTACACTTCCCTCTGCCAACAATTTCATCTAGACTACTTCAGTCTGCCAAAAACTCAGTATAGCTAACTTGCATATGCAAAAAGGAAACTGCAAAATAGAGACGATTGGAAGATGCACTCTGGCATACATATCAAAAAAGTAAACCAGAACTCTGTAGACCAAAACATGGCAGGTCAGAGGCTCAACAAGGCCTGAGACAGGGTCGAACAGGACAGggtcaaacaaaaaacacaacagagaacaaacgagcacatggggtatttatacacaggcatggacaagggacacctgtggaagtaaCGGGGAACAgggctacaaatgagacattagggattacagatgacagggcTAAGGCAGGGTTAAGGcagagacaaaacaaaaaaaaaacatcaatttgaagcacatggggaggtaaacaaaacaagagaacagaggacaggagcaggaaggaccaAAAAACAGGCAGACACAGGCTTAGGTGTGACAGGCAATAGTCAGActgactttttacattgttatattattaacaGATGTCCTAGTTCTTTTGCCAGTCTAATATAAACAGAAATTTTAGGGACATaggtaaattatttaaaaagtgatgcAATAATCTCAGCAATACGTGTgtctgcttgtaaaaaaaaattaaccagcataGAATAGATGCAGATAAACATCATTGCAGTAAAAAGTTACAAGCAATTGGAAGACAGTATTTGATACATTGTGTGTTACttataaagaaagaataaagcATGGTTCCAGTTTTgtccctcagccagcatgtaaATTTACCTGGACCTGGATTAACACCACTAAGCACTGTTTCTAAAATAAACTGACTAAAAATAATACTAGACACCCATTAGGAGAGCTTGGAGGAGTATAAAAAGGTTGTTGCGTGACAGTgactacacacacatagattCCACAAATTGTTCTGGTCCATGTTGACGTGACTGTGTCATACCGCTCCTGTAGATTTGTCAAGAGaacttttatgttttaaatctCCCATCCTTTTCCGCAGCCTGAAGGTGTTTTATTCACATGCAGTGACTAGGAAGACCACTAATCAACAGTGAAACCAGTTGAAAACCAGTTTAAATGAAGTTTGCTCTGTGATGTGGTGTATTGCCATGGTAGAATTAAACATTGTAAGATGGTTAAATTGTGGTGTGgaggaaataaacatttctgCAACCATTCAGAAATAAACTATTGCATTCAAGTAATAATTGCTTGGTATTAACAAGCCCAAAGTGTGTCATTAAAAAATCCCACACAACATTGCACCACCTAAACCACGCACGTTTGCCTAGTGGATTCAAGCTGCTGATGCCAAATTCTGTCCCTATACCATCTGAGTGGCACAGCTGTATATAAGATTTACAGCCAGTTTCACATTTGCATAATCTGTTTGTGGTTTTAGATAAAGCAATAGCTCTTAGGAATTACTGTGGCTCAAATATTAAGCACAACCGTCCTCATTTCTGTTATTATGTAAGTATTATAAGTATTGTAAGTTCAGTAAAATACTAAATgctgtcagactgtaaaaagaGACAGTCACAGGCACTgactaataaaaacaatacagtgGTTTAGATTATTACTAGTGCATTTATGCTTTTATACTTACTTGTTTCAGTGTACTGCAGTTATTTTTAGAATTTTGCAAAGAACAACTGTATTCTGAAAAGTAGTCAAATCAAAATGGTTAaatgacacttttttaaaagcaagtttgtaataatgtattttaattgctATGTTAGATATTGTTCatccctttaagaaagtaactttttacaataaaaataatcattttaaaaagatgttttcattAAATGCCAATTTTCACTAAAATTCCCAATCTGATATTGTCTACACTTGGAGCTTTGCATGACAGGCtgggaaaaagtaaaaaaaataagtgtttaaGCTCGAAAATTTGTTTTCTTGAGCATTTCATATAAGGCTCATATATATGGTAAATAGTCAAACGAATTACAAACATtaagttttaatatattttttttattattattaagttttaatattaaactttatttagaGAAATATAATGACAGCGTTGTTGTTGGGTGTTCTATGGTATATGTTAATTTGTTTCTGTCTGTAAAAAATTgcaggctattttttttttttgcattgtgccATAAATGTGCAGAAAAATGTTGTTCCATTACATTTGTTTTCTTGTCTACAGAAgatgtgtttaattatttaagcaCAGAACATCAACAACACTTGCACTTTCATTTATGACCAAATTAAGTTTTGCacatgaaaatgtgtgtgtgttttcttctttCATGTTTTGGAGTTTTGCACCGCCGTCccacaacagagagagagagagagagagagagagagagagtgagaaagatggGGCGTGGAAAAAACGAGAAAACTTAGCCCGTCGTTGGCGCGCGCACAAGCAGCGTATAATGCGTAAAGTGCGCAAAGTGCGCAGGGTTTTCCACGTGCGCTCCGGTGACAGACGCGCGCACGCTGGTGCGCACACTCACAACTGCGAGAGCGAGCAGCGACGAAGAGTGAGCACGAGCAACGGGCGGGAGCAGCAGAAGCGGCTCCACAGAGGTGTAGTCGAGCGCGAGCGGCTCGCGAGAAGACTTTACTCGAGTGGCGGGAGTTGTTTGGTGTGTGATCGATCTGGCGGACAGAGCCCCCCGGACTCAGAGCTCTCGGTTCTGTGGAttgtgtttattctctctcttttctgaagCCCCGGCGCACAGCGGACTCCGCTGtgtcgctgctgctgctgcgcgcGCTCTGAACTTTCTCCGCGTGCTACGTCACAAGGCGTCCGCCGCGAGACGACTCTTCTCCGCCGTGTTTTTTAGGCCACGCGGCAGTTTAGCGCTGAACTCGAACAGAAACGGAACTCGGGAGCGCGCTCGAGGACTCGTGTTTGTTTTCAGTAACCTTCTCTTGTCCCGCGGAGCGCTGACGGGAACGAGCAACACTTTCACTTCGCAtctgttgttgttgctgtttgtttgttgcaCTTCTTAGCTAGCtgggcctgtcacgataactgCTTTTACTGCTGCGTTTGtttggacaatatattattGCAGAAATAATTGCGATAAGCAATAACACCTTTTGATTTTAATCTGCTAAAAAATGTATAGCCTACTATAATCGCATCGAATAAACGCCTACATTAGCACCAATAGAAGCgctttcaaaacattttaatgactAAGAATTCTCTGGTTTTGTAACATCTGGAATAAGTCAAACATAATCTAAAAACAAAGCAGTGTTTTGTTGagcatttttttcacactatcaGTTCATTTTCGTAcctattacaaaataaaaattataaaaaaaaacttataggTACTGTTGATGTCAGCAAATATTATATTGAGGTCATTAAGCCCATTCATGCATTACAAAAGCTAGAACgagtaattatcgtgacagttttttttttgtatctattATCTTTTGCTAGTACTTGTTAGTTCTTGTTGTTCATCACCCGCTCGCTCGCGCGTGTCTTCCTCGTTAATGCACTTGTTGCCCATCGCGCAGCATGGAGGATCCTCGACCACCGACGCTAACCGGACTCTCGAGTCTGGCCAGACTTGCGGACAGCAGCAGACCTGAGCGCGCGAGCACCATCATGACGATCACGGGCTCGCGGGGCAAGAGTGCCATTCAGATCCATCACTACCAacctcttcatcatcatcaccttcatcatcatcaccttccTCATCATCCTCACCCGCATCCTAGCTTTCAGCACCACCACAGTCATTACAGCAGCAAGCAGAGTAGAGGGGTCTCGTGCGTGCAACTCGGACTGCCTCGCGCCACGGCAACATCCAGGcagcatcaacagcagcagcagcagcaggacgagtgcgaggaggaggaggaagacgaCGAAGATGAGgtagaggaggaagaagaggagcaacagcagcagcagcagaatctgcagaagcagcatcagcagcagcaggtgaACACGTGGACCCGCGTGGAAAGTACCACCAGCGGAGAGTCCCGTCAGGCGCGCGAGCTCACGGCGGCCCGTGACGCAAGGAGAAgcatcagcaccagcagcacctccacctccaccaccagcagcagcatctcAGAGACCGCGCGCGAGTTGTGCCGGGCTGTCTCCGTGTCTCTGGGCTTGGTTTCCGCAGACTGTCACGAGCTGCTGGGAGACACCGGTGGTGCCAGCAGCCGCGCGCACTTGCAGCAGctcgtgcagcagcagcagcagcagcagcgtcagCAGCCTCCTCAGGTCCCGTTCGACTGTTGCTTTGAGAGCTGCTGCGCGAGGGACGGCTGCACCGGCGCGGGCACGGGCGCGCGAAACGACCAGCACCACCAGCAAGAGCAGCACCAGCACCACCGGCGCGCGCCCATCGACATGTACAAAGTGGGTGAGGACGACGCGCACGCAGAAAGCACAGTGACCGCGGCCACACTACATGACCCGGCCGTTCGCGAGCACCAGCTGTTCAGCCTCACGAGCCTGGAGTccaggaacagcagcagcagcggcggcggcggcacCGCAGGCAGCGCGTGCCAATACGAGCCACAGGTGCAGCTGGAGCCGCTGTGTCACCGCGAGGATCCGTACGCCGCCGGGGAGCCGTACGGAGGCAGCGTCGCGCCCCCTTACGGGGTCAAGGTGAAGTGCGAGGCGCTCGAGACCTGGGGTAGAAGCCCGTACCCACAAAACTACCCTTCGACTATGTATCCCGCGTACGGACCTGCCCCTAACCAGCACGCCCAGtacgggggccccccagggccgCACGCGGATCACTACGAGCGCGAGCCATGGTTCCGCGCGCCCTACGGGCCCACGCCCACCGTCAAAAACCAGGTGGGGGAATGGCTGGACGTCAGCACGCTCGCGGATGGCAGgtTTGAGGGTGGGAGGGAGGTGTTTCCCATggacttttttttccctcctcagCGCACCTGCCTGATCTGCTCTGATGAAGCATCTGGGTGTCATTATGGCGCGCTCACCTGTGGCAGCTGCAAGGTGTTCTTCAAGCGAGCTGCTGAAGGGAAGCAGAAGTATCTTTGTGCCAGTAGGAACGACTGCACCATTGATAAGCTGCGGAGGAAGAATTGCCCCTCTTGTCGTCTGAAGAAGTGCTTTGAGGCAGGAATGACTCTTGGAGCACGAAAGCTAAAGAAGATCGGACAGCTGAAGGGTCCAGAGGAGGAGAGCGCAGCACCGGGCATGCCTCCTAGATTCTGTTCATCCGAATTGACTCCGATACCGTCACCTAAGCTGGGCCTGACTTTCCACTCCCAGCAAGTGTTCCTGGGTATTCTAGAGGCCATCGAGCCCGAGGTGGTAAATGCCGGACACGACCACTGTCAGCCTGACTCTGCTGCAGCTCTGCTGACCAGTCTCAACGAGCTCGGAGAGAGGCAGCTGGTCAAAGTGGTCAAATGGGCCAAAGGACTGCCAGgtttcCGCAATCTGCACGTGGATGATCAAATGACGATGATTCAGCATGCGTGGATGGGCGTGATGGTGTTCGCTCTTGGTTGGAGGTCGTACAAAAACGTGAACGCTCGGATGCTGTACTTCGCTCCAGACCTGGTCTTCAACGATCAGAGGATGCATATCTCCAACATGTATGAGCACTGTATGCAGATGAAGCACCTGTCACAGGAGTTTGTGCTCCTTCAGGTCACTCAGGAGGAGTTCCTCTGCATGAAGGCCCTCCTACTCTTCAGCATCATTCCTGTAGAAGGTCTGAAGAGTCAAAAGTATTTTGATGAGCTGCGTCTCACGTACATTAACGAGCTGGACCGTCTGATTAATCAAGGGAGGAAGAGTAACTGCGCACAGCGCTTCTACCAGCTCACACGCCTCATGGACTCGCTGCAGCCGATTGTGCGGAAGCTGCACCAGTTTACCTTTGACCTTTTCGTCCAGGCCCAGTCTCTGCCCACTAAGGTCAGCTTCCCTGAGATGATCGCCGAGATCATTTCCGTCCAAGTACCAAAGATCCTCGCTGGCCTGGCCAAGCCAATCCTGTTCCACAAGTGACCCCAGGCTCCGCCTTCCAAGCCCAGACTGGCCAAGCCCACGGCCACCGATCCCGTCTAGATCCGGATTGATCCGGTCTGTTCCAGTCCACGGCACGGCCCGCACGGCTTTTTCTCTCAAGGTTCTGCAGGGAGACCTAAAGatttgtactctctctctctctttttctctctctctctccctctgtcctcctctctcgctccttatccttttcttctctttcgaAAAATGTCTCTGAAATCTGCCGAGGACCATTACATTGTTACACCGGTCTATCTTCTGCTGCGAGATAATTTCACATCATTTTCTCACGCTGATAGCGCCGTGTGgatcgcctctctctctctctctctctctctctctctctccctgtctctctcttttttctcaagCATTATTCCTGAAGAGTCTGAAATCTGAAGAACCTTTAGTTTTTACATGAGCCCTGAAAAGACAAAATGTGCACTAGTAGTTTCCCTTAAAAAAGGCACTGCTCTGTTTacgtcttatatatatatatatatatatatttcactctATGCATTTGTGTTGGCTTGGAAACGTAAGCGTTTACTGCCGTAAAGCTCGAGTTCAGGCTGCtttaaccagaaaaaaaaaaaaaaaaactaaaggcagagaaaaGCTATCTAATGGCCTCCAAAATTACTCACTAATCAAAAGAGTGACAATCAAGCGTGTTTATATCCGTGTCTGGGTTTCTATTTTTCGTATGGTGGTGTTCAAGTCCCATGTAACTTAAGACGCACAGACGTTTTCTCTTCTCCGATTTTACAGCGGCCACAAAACAGGAACCAACGTGTGTTTCTAAAACCTGCAACACATAACGACTGCGCAGTATTTCCAGTTCTCTTGGATTGGATTCTCTACTGTATTACGCAGTTATTTTACACTACCATTCAAAATCTGGAATCACTGCAATAACATTCAGCATTTTTCTTAAATTCTCAAATTTTTGCCACTTTACTTCATACTTGAAGCGTTTTAGGAACaataaaaagtgctaaacaTTCATTCAGATGTTAGTATTAGTCGAACTTTAGAGATGGTAATTAGTAGATTAGTAGAACTTTAGAGACGTGAATGTTATTAGACCTTCTTCTTTGATATTAGGCTATAAGTTTAGGCTTTCATTATGAATTAAGACACAGATTTGAGCTTTAGATATAACTatagatattaatgttattagaacttcattagGGCTATTAATGATGCACTGCATTACAGATTTAGACGATCATGATCTTTATCAAAAGCTttatctttgaaaaaaaaacatttgatacaTTTATCTATAAACAAAATGAATACGTTTGTGATAACAGTGATGCTAAACTTTTGAATGGTAGTGGGCTCTGCTGATAAAGGATAACAATATGAGAACTTaatgcacaaacacactcttacacacacacacacacacacacattcttacacacacaacataacCTTTGGTGAGGGCTGCATGTTCTCTCtcactttactttttaatagaATCGTCTTTTAAACTTGCCAGTCTGACAATTACGATAATAACTGTAGTTATTATCAACTCATTTATTTCTCTTCACTGCTTTCAAcctatacaaaaaaacacacaaaacaaaaaaagacaaacaaaaaaaaaaacactttgcatGGTAAGGTTTTGCTCGTTAgatgtttttacacttttacaaaaATTAGTCTGTACATGTTTCACTCTTTATGATGTGAGGATTTTTGTAGCGAATAAGCTCTTGCACTTCAATGTGAATCTTCCAGACAAGCGCACTGCTTTAGCCTTTTTCTCATGGGCGGAGTTTGAGGAGCGAAGGACGTGCAACGAAACCACGACTAGCCACACCCCCAAAAGGTTTATTCCAATAA

Function

symbol description
ar Enables androgen binding activity; nuclear receptor activity; and steroid hormone receptor activity. Acts upstream of or within gamete generation; male courtship behavior; and male gonad development. Predicted to be located in nucleus. Is expressed in several structures, including digestive system; heart; male organism; nervous system; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in several diseases, including attention deficit hyperactivity disorder; conduct disorder; disorder of sexual development (multiple); reproductive organ cancer (multiple); and spinal muscular atrophy (multiple). Orthologous to human AR (androgen receptor).

NR:

description
PREDICTED: androgen receptor-like

GO:

id name namespace
GO:0006357 regulation of transcription by RNA polymerase II biological_process
GO:0043401 steroid hormone mediated signaling pathway biological_process
GO:0030521 androgen receptor signaling pathway biological_process
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0005497 androgen binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K08557 AR, NR3C4; androgen receptor

RNA

RNA id representative length rna type GC content exon number start site end site
TU32264 False 324 TUCP 0.45 2 36432208 36438970
XM_022685081.1 True 8181 mRNA 0.45 8 36249824 36458929

Neighbor

gene id symbol gene type direction distance location
LOC103037324 NA coding upstream 285227 35942095 ~ 35964597 (+)
msn msn,moes,LOC108411308,LOC106567791 coding upstream 325867 35877193 ~ 35923957 (+)
zc3h12b zc3h12b,LOC107557112,LOC107741193,LOC107597257,LOC107672716 coding upstream 399633 35823196 ~ 35850191 (+)
LOC103040467 LOC108444278 coding upstream 439717 35807467 ~ 35810107 (+)
gab3 gab3,LOC107557096 coding upstream 573503 35638347 ~ 35676321 (+)
yipf6 yipf6,LOC107596694,LOC107746343,LOC107757533 coding downstream 152334 36611263 ~ 36619989 (+)
LOC111191796 NA coding downstream 167839 36626768 ~ 36628605 (+)
stard8 stard8 coding downstream 214042 36672971 ~ 36796896 (+)
c3hxorf56 cunhxorf56,cssa13hxorf56,zgc:103697,LOC107548454,LOC107655899,LOC101478835 coding downstream 524253 36983182 ~ 37003775 (+)
eda eda,LOC106603304,LOC107655915,LOC107757537,LOC106567777 coding downstream 979154 37438083 ~ 37490233 (+)
G23996 NA non-coding upstream 67328 36182146 ~ 36182496 (+)
G23967 NA non-coding upstream 210415 36004641 ~ 36039409 (+)
G23968 NA non-coding upstream 211228 36015085 ~ 36038596 (+)
G23929 NA non-coding upstream 325256 35924344 ~ 35924568 (+)
G23876 las1l non-coding upstream 386162 35861202 ~ 35863662 (+)
G24011 NA non-coding downstream 246 36459175 ~ 36463619 (+)
G24029 NA non-coding downstream 7632 36466561 ~ 36467812 (+)
G24030 NA non-coding downstream 9182 36468111 ~ 36468517 (+)
G24031 NA non-coding downstream 9684 36468613 ~ 36471782 (+)
G24012 NA non-coding downstream 24917 36483846 ~ 36486600 (+)
LOC103040783 LOC108411309 other upstream 153098 36043431 ~ 36096726 (+)
trdn NA other upstream 947477 35226798 ~ 35302347 (+)
cnksr3 cnksr3,LOC108426324,LOC108257645,LOC107560196 other upstream 2285316 33894336 ~ 33964508 (+)
cebpzos cebpzos other upstream 2469921 33777942 ~ 33779903 (+)
LOC107197779 LOC107197779,LOC108426271,LOC106607680,LOC108257511 other upstream 2654113 33587529 ~ 33595711 (+)
LOC111194342 NA other downstream 1130177 37589106 ~ 37714382 (+)
G24345 cwc15,LOC107747811,LOC107597228,LOC107732607 other downstream 1469426 37928355 ~ 37933989 (+)
G24390 NA other downstream 1634045 38092974 ~ 38098324 (+)
G24431 NA other downstream 1773664 38232593 ~ 38237041 (+)
G24463 NA other downstream 1900406 38359335 ~ 38382310 (+)

Expression


Co-expression Network