G57772


Basic Information

Item Value
gene id G57772
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 11746377 ~ 11757663 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU65803
CGACTATTTACAAAGATGAATGTTTTATCAGGTGTGTAGGAGCTGGTGGAATTCAAATCTGAGCCCGGTTTGGGAAGGAATCCATCGATGCTGATCTCTGGTTGCTCCTGGTGATGCTGGACTGGGAGCATGTTGGCTACGGAGGCCGCTCCGAGCACGGCCATGAGGGCAGTTCGGTGATCCGACACCCTGGATTTCTGCCAGAACACAGCCTTGTTGTGGCTCAACGTGATCCGTAACTCAGGCTTAATAACAGCATAGGCCATGAGTAAGTTCTGGACCCTCTTCAGTTCCTCTTTGCATTTCTTAGTGTTGGAATAATACTGCCGTCTGACAGGGAGGTTCTTGAACAGATTTGCTGCACACACAGTGGTGCCCTCGCCAAGATGTGATGGCTTTTGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65803 True 403 lncRNA 0.50 4 11746377 11757663

Neighbor

gene id symbol gene type direction distance location
CI01000009_11711277_11714191 MSTN, GDF-8, MSTNB coding upstream 31683 11711160 ~ 11714694 (+)
CI01000009_11669960_11702667 HIBCH coding upstream 42838 11669960 ~ 11703539 (+)
CI01000009_11493236_11526914 VWC2L coding upstream 219463 11493236 ~ 11526914 (+)
CI01000009_11434018_11455253 NA coding upstream 290742 11433792 ~ 11455635 (+)
CI01000009_11342784_11347580 NA coding upstream 397550 11342784 ~ 11348827 (+)
CI01000009_11761868_11765848 ORMDL1.S, ORMDL1 coding downstream 3943 11761606 ~ 11766944 (+)
CI01000009_11769442_11773619 OSGEPL1 coding downstream 11779 11769442 ~ 11773619 (+)
CI01000009_11789703_11791511 NA coding downstream 32040 11789703 ~ 11791736 (+)
CI01000009_11803818_11808988 SLC40A1 coding downstream 44721 11802384 ~ 11809235 (+)
CI01000009_11835682_11873220 STAT4 coding downstream 78019 11835682 ~ 11873330 (+)
G57665 NA non-coding upstream 80052 11664022 ~ 11666325 (+)
G57654 NA non-coding upstream 91013 11620460 ~ 11655364 (+)
G57606 NA non-coding upstream 213597 11530797 ~ 11532780 (+)
G57626 NA non-coding upstream 233173 11512902 ~ 11513204 (+)
G57618 NA non-coding upstream 278853 11467265 ~ 11467524 (+)
G57786 NA non-coding downstream 20176 11777839 ~ 11778105 (+)
G57787 NA non-coding downstream 22666 11780329 ~ 11780567 (+)
G57789 NA non-coding downstream 29241 11786904 ~ 11787326 (+)
G57790 NA non-coding downstream 29913 11787576 ~ 11787784 (+)
G57719 NA non-coding downstream 57406 11815069 ~ 11822531 (+)
CI01000009_09853929_09854476 SAP18 other upstream 1889790 9853929 ~ 9856587 (+)
G56100 NA other upstream 2616091 9129300 ~ 9130286 (+)
G53651 NA other upstream 5497985 6245564 ~ 6248392 (+)
CI01000009_05931829_05943829 KCNH3 other upstream 5813576 5931718 ~ 5943899 (+)
G53388 NA other upstream 6207323 5522242 ~ 5540638 (+)
G57811 NA other downstream 176279 11933942 ~ 11935251 (+)
CI01000009_12432736_12435509 NA other downstream 674895 12432538 ~ 12436017 (+)
G57682 NA other downstream 1067806 12825469 ~ 12892339 (+)
G57691 NA other downstream 1148781 12906444 ~ 12918465 (+)

Expression


Co-expression Network