G24144


Basic Information

Item Value
gene id G24144
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 37010970 ~ 37013258 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU32434
accagcacctgtatttgTAAAGAACatctagtaAAGAACTGGCATATAAGTGGAAATATACTGTGTTTATCCTGTATAATTCTTCAATTAAATGtacacaaatcaaacaaaatattaacattttagctCCCCTGATCATATAGGATCCGGCCAGCAtcctgtgaccactgatgaaacagagaatgaccaacacaaactgtgcagcaacagattacAGAGCTTCTGTTTCTGACTTTAAATCTACAAGGTGGAGAAGCTAGGTCTGTCTTaaagagtggaggacagtgagtgaacacagtgtttaaaaactccagcagcactgctctccaaaccatcactgatcatcagtaaattttacattttatttggaaatcaagtaagcagagtctggaggaagagtggagagacgcagttcaagctgcttgaggcctagtgtgaagtttctacaatcagtgatggttttcgAGAGTCATGTATCTGctattatcaacaataaaataaataaatgcttaaaaatagattactttgtgtgtaataaatacatc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU32434 True 545 lncRNA 0.36 2 37010970 37013258

Neighbor

gene id symbol gene type direction distance location
c3hxorf56 cunhxorf56,cssa13hxorf56,zgc:103697,LOC107548454,LOC107655899,LOC101478835 coding upstream 7195 36983182 ~ 37003775 (+)
stard8 stard8 coding upstream 214074 36672971 ~ 36796896 (+)
LOC111191796 NA coding upstream 382365 36626768 ~ 36628605 (+)
yipf6 yipf6,LOC107596694,LOC107746343,LOC107757533 coding upstream 390981 36611263 ~ 36619989 (+)
LOC103037324 NA coding upstream 1046373 35942095 ~ 35964597 (+)
eda eda,LOC106603304,LOC107655915,LOC107757537,LOC106567777 coding downstream 424825 37438083 ~ 37490233 (+)
LOC103022398 LOC103022398,LOC108412744,LOC108259816 coding downstream 484631 37497889 ~ 37503953 (+)
igbp1 igbp1 coding downstream 497676 37510934 ~ 37517867 (+)
LOC103021778 NA coding downstream 620523 37633781 ~ 37637628 (+)
LOC103046026 cx27.5,LOC108414812,LOC107597344,LOC107687661,LOC107680359,LOC107592389,LOC107732608 coding downstream 955976 37969234 ~ 37975259 (+)
G24069 NA non-coding upstream 115670 36890577 ~ 36895300 (+)
G24047 NA non-coding upstream 208725 36800897 ~ 36802245 (+)
G24046 NA non-coding upstream 210450 36799918 ~ 36800520 (+)
G24041 NA non-coding upstream 387708 36622118 ~ 36623262 (+)
LOC111191795 NA non-coding upstream 404716 36605539 ~ 36606254 (+)
G24160 NA non-coding downstream 138181 37151439 ~ 37151671 (+)
G24164 NA non-coding downstream 202828 37216086 ~ 37216521 (+)
G24168 NA non-coding downstream 218532 37231790 ~ 37313329 (+)
LOC111196047 NA non-coding downstream 246550 37259808 ~ 37269100 (+)
G24188 NA non-coding downstream 473880 37487138 ~ 37492278 (+)
ar ar,LOC108443198 other upstream 552041 36249824 ~ 36458929 (+)
LOC103040783 LOC108411309 other upstream 914244 36043431 ~ 36096726 (+)
trdn NA other upstream 1708623 35226798 ~ 35302347 (+)
cnksr3 cnksr3,LOC108426324,LOC108257645,LOC107560196 other upstream 3046462 33894336 ~ 33964508 (+)
cebpzos cebpzos other upstream 3231067 33777942 ~ 33779903 (+)
LOC111194342 NA other downstream 575848 37589106 ~ 37714382 (+)
G24345 cwc15,LOC107747811,LOC107597228,LOC107732607 other downstream 915097 37928355 ~ 37933989 (+)
G24390 NA other downstream 1079716 38092974 ~ 38098324 (+)
G24431 NA other downstream 1219335 38232593 ~ 38237041 (+)
G24463 NA other downstream 1346077 38359335 ~ 38382310 (+)

Expression


Co-expression Network