G24237


Basic Information

Item Value
gene id G24237
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 37612171 ~ 37612601 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU32558
GACGTCCCCCGAACCAACACCGCGAACGTCCCCAGGACGGGCTTTTTGTAGGGTCGCCAAAATGTTGCAGCGGACGTCCTCATAGGACGTTTGTAGGACCACCAGGGAACCTTCACGGGACGTCCAGGGGACGTTGATGGAAAGTCCTCTAAACGTCGTTAGTAACGTTCTTAGGACGTTTCTAGAACCACCTGAGGACTCCGAGGGGACGCTTATGGGAAGTGTTTTAAAGGTTTTGTTTAACGTTCTTAGGACGTTCATAGGACCCCGAAATAACATCCAGGGGACTCtgaggagacgtttatacaacATACTTAGGACGTTTGTAGGACCTCCTGGTAACACGGACTATG

Function

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
ko04260 Cardiac muscle contraction
ko04261 Adrenergic signaling in cardiomyocytes

RNA

RNA id representative length rna type GC content exon number start site end site
TU32558 True 353 lncRNA 0.51 2 37612171 37612601

Neighbor

gene id symbol gene type direction distance location
igbp1 igbp1 coding upstream 94304 37510934 ~ 37517867 (+)
LOC103022398 LOC103022398,LOC108412744,LOC108259816 coding upstream 108218 37497889 ~ 37503953 (+)
eda eda,LOC106603304,LOC107655915,LOC107757537,LOC106567777 coding upstream 121938 37438083 ~ 37490233 (+)
c3hxorf56 cunhxorf56,cssa13hxorf56,zgc:103697,LOC107548454,LOC107655899,LOC101478835 coding upstream 608396 36983182 ~ 37003775 (+)
stard8 stard8 coding upstream 815275 36672971 ~ 36796896 (+)
LOC103021778 NA coding downstream 21180 37633781 ~ 37637628 (+)
LOC103046026 cx27.5,LOC108414812,LOC107597344,LOC107687661,LOC107680359,LOC107592389,LOC107732608 coding downstream 356633 37969234 ~ 37975259 (+)
LOC103045011 LOC103045011,LOC108414810 coding downstream 372111 37984712 ~ 37988933 (+)
col10a1 col10a1,col10a1b,LOC108415286,LOC107548284,LOC107704357,LOC107710900 coding downstream 731788 38344389 ~ 38350324 (+)
LOC103029663 NA coding downstream 768989 38381590 ~ 38400321 (+)
G24231 NA non-coding upstream 26881 37582120 ~ 37585290 (+)
G24228 NA non-coding upstream 35279 37571254 ~ 37576892 (+)
G24219 taf1,LOC108412743,LOC107596195,LOC105893216 non-coding upstream 59918 37551538 ~ 37552253 (+)
G24188 NA non-coding upstream 119893 37487138 ~ 37492278 (+)
G24168 NA non-coding upstream 298842 37231790 ~ 37313329 (+)
LOC111191733 NA non-coding downstream 4177 37616778 ~ 37620270 (+)
G24242 NA non-coding downstream 33477 37646078 ~ 37651113 (+)
G24253 NA non-coding downstream 109335 37721936 ~ 37724137 (+)
G24271 NA non-coding downstream 150774 37763375 ~ 37764318 (+)
G24317 NA non-coding downstream 242841 37855442 ~ 37857225 (+)
ar ar,LOC108443198 other upstream 1153242 36249824 ~ 36458929 (+)
LOC103040783 LOC108411309 other upstream 1515445 36043431 ~ 36096726 (+)
trdn NA other upstream 2309824 35226798 ~ 35302347 (+)
cnksr3 cnksr3,LOC108426324,LOC108257645,LOC107560196 other upstream 3647663 33894336 ~ 33964508 (+)
cebpzos cebpzos other upstream 3832268 33777942 ~ 33779903 (+)
G24345 cwc15,LOC107747811,LOC107597228,LOC107732607 other downstream 315754 37928355 ~ 37933989 (+)
G24390 NA other downstream 480373 38092974 ~ 38098324 (+)
G24431 NA other downstream 619992 38232593 ~ 38237041 (+)
G24463 NA other downstream 746734 38359335 ~ 38382310 (+)
LOC111191729 LOC108416192 other downstream 746859 38359460 ~ 38379336 (+)

Expression


Co-expression Network