Gene
RNA
| Item | Value |
|---|---|
| gene id | G24485 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035899.1 |
| NCBI id | CM008302.1 |
| chromosome length | 74127438 |
| location | 38503227 ~ 38503518 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU32945 | True | 292 | lncRNA | 0.47 | 1 | 38503227 | 38503518 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| hdac2 | hdac2,LOC108416127 | coding | upstream | 65163 | 38428649 ~ 38438064 (+) |
| hs3st5 | hs3st5 | coding | upstream | 75309 | 38416750 ~ 38427918 (+) |
| LOC103029663 | NA | coding | upstream | 102906 | 38381590 ~ 38400321 (+) |
| col10a1 | col10a1,col10a1b,LOC108415286,LOC107548284,LOC107704357,LOC107710900 | coding | upstream | 152903 | 38344389 ~ 38350324 (+) |
| LOC103045011 | LOC103045011,LOC108414810 | coding | upstream | 514294 | 37984712 ~ 37988933 (+) |
| lama4 | NA | coding | downstream | 23060 | 38526578 ~ 38577159 (+) |
| tube1 | tube1 | coding | downstream | 76445 | 38579963 ~ 38606640 (+) |
| LOC103028301 | LOC108415536,LOC107709524 | coding | downstream | 141813 | 38645331 ~ 38662640 (+) |
| LOC111191700 | LOC108415880 | coding | downstream | 218159 | 38721677 ~ 38726048 (+) |
| traf3ip2 | LOC107550525 | coding | downstream | 225794 | 38729312 ~ 38742584 (+) |
| G24476 | NA | non-coding | upstream | 10522 | 38449995 ~ 38492705 (+) |
| G24474 | NA | non-coding | upstream | 62567 | 38440352 ~ 38440660 (+) |
| G24437 | ufl1 | non-coding | upstream | 243978 | 38256201 ~ 38259249 (+) |
| G24432 | NA | non-coding | upstream | 256938 | 38243485 ~ 38246289 (+) |
| G24359 | NA | non-coding | upstream | 466479 | 38027773 ~ 38036748 (+) |
| G24531 | NA | non-coding | downstream | 78109 | 38581627 ~ 38582793 (+) |
| G24535 | NA | non-coding | downstream | 87423 | 38590941 ~ 38592527 (+) |
| G24541 | NA | non-coding | downstream | 113584 | 38617102 ~ 38617433 (+) |
| G24542 | wisp3 | non-coding | downstream | 113968 | 38617486 ~ 38617866 (+) |
| G24543 | wisp3 | non-coding | downstream | 116724 | 38620242 ~ 38620480 (+) |
| G24463 | NA | other | upstream | 120917 | 38359335 ~ 38382310 (+) |
| LOC111191729 | LOC108416192 | other | upstream | 123891 | 38359460 ~ 38379336 (+) |
| G24431 | NA | other | upstream | 266186 | 38232593 ~ 38237041 (+) |
| G24390 | NA | other | upstream | 404903 | 38092974 ~ 38098324 (+) |
| G24345 | cwc15,LOC107747811,LOC107597228,LOC107732607 | other | upstream | 569238 | 37928355 ~ 37933989 (+) |
| G24534 | NA | other | downstream | 81921 | 38585439 ~ 38586278 (+) |
| fyn | fynb,fyn,LOC107704353,LOC103458010 | other | downstream | 163991 | 38667509 ~ 38717435 (+) |
| G24594 | smim8 | other | downstream | 422178 | 38925696 ~ 38926982 (+) |
| G24583 | NA | other | downstream | 435839 | 38939357 ~ 38947222 (+) |
| G24719 | NA | other | downstream | 541652 | 39045170 ~ 39045781 (+) |
