G24534


Basic Information

Item Value
gene id G24534
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 38585439 ~ 38586278 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU33020
gtatattttttttttttacaatttcgtTTTTTCAAGAGTCTTTCGGCCACCTGTAAAGGAAAGCAATGTTCAGTACaacctgtaaagaaaaaataatgtgttcccCCCCTACTTTAGCAAATCACAGTTTATAAccctatatgtgtaaatgttaaagttgcAATTCGTGTTGTtcgtttcttctttcttcttgtttCAGGGTTCTGAAGGTATACTACCTTGATGTCTGCAATATCAGTGAATGAAAAGTATGAGTTGGTGTGTGATAAgactatgtgtgttttttaatgagatgtgttttagagtttctgtatgtagtgtacttTGACGCAATCGAAACGTTGTTGAATGAGTCACTCCCTCACTTCTGCTCCTCAGTCACAGCCATGCTGTGTgctgtctgctgctgtgctctgAGAAATCTTTTCTCTGCTGTGGCCAGGCCAGGCCCGTGCTGCGGGGGCTCTGCTGcccctccttcctgctgcggGCCTCCATCTGGGTCAGACGATTCAGCTGCTGTGCTCACCTCTCCCTCTGGCTCTCTAAGCGATCTCTGTTGTTGCACAGCTGTAGAACCCTCGCCTATCAGTTGATCTGCGTACGTTGTTCTCTCAGTCACCTGGAAAGGCTCAATCCAGCCATGCTCGTTCCCCTTTCGTGCGTAGTGGTGGAGGAGCCCTGACTCCGTGTCTGTATTGGTCCACCTTTGCACCACGTTCTCCTTCTCCCcctgtgtaaacagatctgaaacGAAACTTTTGTATtcgttataatcatgtttaaggtTCACTATTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU33020 True 799 TUCP 0.45 2 38585439 38586278

Neighbor

gene id symbol gene type direction distance location
lama4 NA coding upstream 8280 38526578 ~ 38577159 (+)
hdac2 hdac2,LOC108416127 coding upstream 147375 38428649 ~ 38438064 (+)
hs3st5 hs3st5 coding upstream 157521 38416750 ~ 38427918 (+)
LOC103029663 NA coding upstream 185118 38381590 ~ 38400321 (+)
col10a1 col10a1,col10a1b,LOC108415286,LOC107548284,LOC107704357,LOC107710900 coding upstream 235115 38344389 ~ 38350324 (+)
LOC103028301 LOC108415536,LOC107709524 coding downstream 59053 38645331 ~ 38662640 (+)
LOC111191700 LOC108415880 coding downstream 135399 38721677 ~ 38726048 (+)
traf3ip2 LOC107550525 coding downstream 143034 38729312 ~ 38742584 (+)
rev3l rev3l,LOC107569208,LOC104962055,LOC107396009,LOC107577708 coding downstream 161199 38747477 ~ 38800101 (+)
gjb7 gjb7,LOC106571283,LOC107576048,LOC107563147 coding downstream 342360 38928638 ~ 38933850 (+)
G24531 NA non-coding upstream 2646 38581627 ~ 38582793 (+)
G24485 NA non-coding upstream 81921 38503227 ~ 38503518 (+)
G24476 NA non-coding upstream 92734 38449995 ~ 38492705 (+)
G24474 NA non-coding upstream 144779 38440352 ~ 38440660 (+)
G24437 ufl1 non-coding upstream 326190 38256201 ~ 38259249 (+)
G24535 NA non-coding downstream 4663 38590941 ~ 38592527 (+)
G24541 NA non-coding downstream 30824 38617102 ~ 38617433 (+)
G24542 wisp3 non-coding downstream 31208 38617486 ~ 38617866 (+)
G24543 wisp3 non-coding downstream 33964 38620242 ~ 38620480 (+)
G24546 NA non-coding downstream 42490 38628768 ~ 38628976 (+)
G24463 NA other upstream 203129 38359335 ~ 38382310 (+)
LOC111191729 LOC108416192 other upstream 206103 38359460 ~ 38379336 (+)
G24431 NA other upstream 348398 38232593 ~ 38237041 (+)
G24390 NA other upstream 487115 38092974 ~ 38098324 (+)
G24345 cwc15,LOC107747811,LOC107597228,LOC107732607 other upstream 651450 37928355 ~ 37933989 (+)
fyn fynb,fyn,LOC107704353,LOC103458010 other downstream 81231 38667509 ~ 38717435 (+)
G24594 smim8 other downstream 339418 38925696 ~ 38926982 (+)
G24583 NA other downstream 353079 38939357 ~ 38947222 (+)
G24719 NA other downstream 458892 39045170 ~ 39045781 (+)
LOC111196173 NA other downstream 738805 39325083 ~ 39340971 (+)

Expression


Co-expression Network