G57792


Basic Information

Item Value
gene id G57792
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 11834738 ~ 11834960 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU65825
CCTACAAATGTTTTACATAGATCCACTGAGTGACAAAAAGATGAAAAAGAAAACCCTTTAAAAAGCATAAGAACTCCTTGTGGCACTGCATCAGCCACAATCACAAATTCTTCTGGAGTAACAGGAATTCCATGCTTTACTAAAAACTCAGAATAATTACAAATTGAACCATTCTGACTGAAAAGTTACATCGCAGAAGTTAATGCTTTTTGGACGTACATCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65825 True 223 lncRNA 0.35 1 11834738 11834960

Neighbor

gene id symbol gene type direction distance location
CI01000009_11803818_11808988 SLC40A1 coding upstream 25503 11802384 ~ 11809235 (+)
CI01000009_11789703_11791511 NA coding upstream 43002 11789703 ~ 11791736 (+)
CI01000009_11769442_11773619 OSGEPL1 coding upstream 61119 11769442 ~ 11773619 (+)
CI01000009_11761868_11765848 ORMDL1.S, ORMDL1 coding upstream 68407 11761606 ~ 11766944 (+)
CI01000009_11711277_11714191 MSTN, GDF-8, MSTNB coding upstream 120044 11711160 ~ 11714694 (+)
CI01000009_11835682_11873220 STAT4 coding downstream 722 11835682 ~ 11873330 (+)
CI01000009_11875722_11882183 STAT1B, STAT1 coding downstream 40526 11875486 ~ 11882921 (+)
CI01000009_11892226_11892558 NA coding downstream 57266 11892226 ~ 11892677 (+)
CI01000009_11993879_12004644 NEMP2 coding downstream 158684 11993644 ~ 12004765 (+)
CI01000009_12022660_12022944 NA coding downstream 187600 12022560 ~ 12023388 (+)
G57719 NA non-coding upstream 12207 11815069 ~ 11822531 (+)
G57790 NA non-coding upstream 46954 11787576 ~ 11787784 (+)
G57789 NA non-coding upstream 47412 11786904 ~ 11787326 (+)
G57787 NA non-coding upstream 54171 11780329 ~ 11780567 (+)
G57786 NA non-coding upstream 56633 11777839 ~ 11778105 (+)
G57813 NA non-coding downstream 103418 11938378 ~ 11938639 (+)
G57724 NA non-coding downstream 332571 12167531 ~ 12168221 (+)
G57737 NA non-coding downstream 336403 12171363 ~ 12172140 (+)
G57850 NA non-coding downstream 353585 12188545 ~ 12188820 (+)
CI01000009_12198114_12221988 NA non-coding downstream 362445 12196699 ~ 12221993 (+)
CI01000009_09853929_09854476 SAP18 other upstream 1978151 9853929 ~ 9856587 (+)
G56100 NA other upstream 2704452 9129300 ~ 9130286 (+)
G53651 NA other upstream 5586346 6245564 ~ 6248392 (+)
CI01000009_05931829_05943829 KCNH3 other upstream 5901937 5931718 ~ 5943899 (+)
G57811 NA other downstream 98982 11933942 ~ 11935251 (+)
CI01000009_12432736_12435509 NA other downstream 597598 12432538 ~ 12436017 (+)
G57682 NA other downstream 990509 12825469 ~ 12892339 (+)
G57691 NA other downstream 1071484 12906444 ~ 12918465 (+)
G57701 NA other downstream 1171683 13006643 ~ 13023138 (+)

Expression


Co-expression Network