G24815



Basic Information


Item Value
gene id G24815
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 39526486 ~ 39530263 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence


>TU33396
CTGATTTAAAAGGCAAATAATTATGTTCAGAGAACATACAGCGCAAAACTTGTTTTTGTTCcaaatcattttaattcaacCATATCTGATCACCTCAAAGTGTGATTTGTCTTTACTGCATAGTGAATTACACTTTCTTCACTTGGGCCCATGAGCACCAAATACCAATTCTCTGTAATAGATTAATGTTTGTCTGAATAAATGGTTcttaacacacaaaaaaactacactaaacaaTACCAAACAACCTCCACTCACTTCCACTATCATAACAAACGCCTTTTAATTCTTGGTGGCCTTAGACTTTTGCACAGCACTAAATACAGAGGAGGTAAACTACACCGACACAATGGGGTTAGAACATGATAATCAGGGCGATGATCATTACTGTATTCCAGTCTTCTAGCCACGATAATACTGattgtctctattttttttattaattctatatgttacagAAATGATACTGAATTGGTTTGTCAGATCAGACAGAATTTACATCAAAAAGAGTCTGCAGTTAAACAGTCTTTAACATATTATTCTCCCATGGCTCATGTTGCCTTTTCAAaagcagcttaaaaaaaacacacatttttatttacatttagctttttcaaCCTAATGTCTCTCTGTATTGCTTATTtacatgcttaaaaaaagtcaaaagaaCCTTTCAGATTAATTACATTTTGCCCAACGTGAACATTTTTGTAGAATGTCCCATATTCTACATTTAAATGGCTGCACAACATTATAAATGGAATGTACCATTTATCTTGCTCCCACCATCAGGCCTGGCTCGGCTCGAACTCCAATAATTCACGTACCCTTGCCATATACATGTGTGGGCTAAGGTCCCATGAGGTAACAGCTAATTATCTATTTACATCAGAGGCCAATTTTAAGTCTCAGAtccttttcaaataaaataaacttattGCCCTCTATATCTACTGAATTGGCAAAATCGATGcctcaaagttttttttttattatctccaTCTATTGATCTTTCCTGTTATGACAGGTGTGTTGTTTTCGATTCAGACCCTCACTCAGTAAGCAGCTTGGAAGCTAGTAACTAACTTAAATTACAATTAGGTTAACTATGGAGATAGGAGAGTTTTTCATGAGGAGACAACCACAGTCCTCAATCCCTGAAACACATTCAACTTCAGCAGAATCAACATCTGCAGATGAACAGCGGAAAGATGTTTCAGGTAAGTCAACAACAATGGGGCTGTGGTTAGCATAATTAAACAGTAGCTGCGGTTAGCTCACTGGCTAATATCAGAACCTTTGTTAGAGAGCTCTGGTTAACGCTAGTTTTGTTTTACCATGCACACGCTGGACATGAACATATTCTAAAAATTAGTTATTTACCACTGTTATTTAAACTGAACCTAAAATGAAACCTAATCATATTTAACATTTGCTGTGTCAGGACATGAAAATGACAGACAGACAATGTATAAATCTAAACTAGTAAGTCAATCTCTACAGAATGATTAGTTTGTTTAGGCTTTTTActgtgaaaatatttaatatagctgcagtgaaagagaaaaataaatctttgggCTAAGCCCtggatgtttaaaatgtttggcTCTGCCTGTGATTTACATAAAGTTATCCCATAACTTTGGCATGCATGTTTGCATCATTAGCTAAAATGAGTCTGCATTAAACTggctgtctctgtgttttcccCTCCTCTTTCAttaagaaaattacaggttCAATCAATTCAGGGAGACACAACATATTAAGTGGAGAATGGTCATATGACCACATGAAGAAACCATATGGATTATGTGATTTGATGATTTTATTGATTTCCACATATTTGTTTTATCACAGAGGAGAACCCAGTAAGACTATTAACACAGATGAGAGAGATTAGGCTTAAAAGTTTTGACCTGCTCATTTAGTGCTGAGAGTTTGATATCTGCAGCGGGTCAGTACTTTGTTGAGATTTTGGAGTAAAAGGAATAAAGcgcctttttttattataattccgCATTTACAAATCCCAGACACTGtctgttaaaaaataagaaacactaTGCAACTATGAATCAGGACGAGTTTGTATAAAGGTGACTTTATACCAACTCATCATTTCTTTTCGTGTTGTTTGGGTTACAGGGCCTAAACTGTCCTGTAAAATTCTAGCGACTAGATTTTGTAACCTGTGCAGTATAAGTATAAGTCATTCTTGATTTTACAAGGATTTTCATGAAGCTCCTGTCAATTTAAGTAGAGTTGGATTggaacaacacaacacagagcTTCAGCTAAACTACACCAACTAAAAGTCACTATTATACGAGCGTATAGGTTTTAGGAAGAGCACCGACTGTATCTCGTGATGTTTTAAGTATGGTTGTGTGAGATACTACCAACAAATCACTACTGAGACACTTTAACCAGCCTTGGTTAACACTGCTACCAAGTTTCAGGCACTGTAAATTATTAATGGCATCCAAAGAAATATGCCACTGTCAACTTCAAGGTCCACTAGTAAAAGACATGGTAGTTGTGGTGATTTCATAATCAGATACTTTACACTACTGGTCTAAATCAAAGaggatgtttaaaaaacactgctttacACAGTCTATGGATCAATTTCAGTTATTTGACCATTTATCACTGGGAAAatagaattagaaaaaaatacagtgcatTTGCTGTAAGGCACAATTGAGTAATACCATTGTGGAAAATTAAAACATAGGTTTAGTATTATCAAGAAACATAATTTAGCCCatagaaatattatataaatatcaatataaacaactcttttaataaaacatggtGCTCTGGAGCTCTGAAGCCTAGGGTCACCCCCCCCAGGGCCAAGCACTAGACAGAGGGATATATGGCCGCTCACAGCACTGGGTCCCACAGTTCTCTACAGTGACTGAGCCCCATCCATTACATTTAGGATAAGCTGAAGTGGAAGGTCTACGTTTTGTGCTTCTTGAATTTAACTGCATTACACCTAATGTAATCAAAATGTCCTCATGGCAGTGTTTCAACATCTAGTGTTAAGTCTTCTCAGTAGAGTGTAAAAGGACATATTGGAATTCCAgatgtaattaattacacaatataaataGTAGACTTTTAGGGGATAAATAAAATGTGGACAATGTCTGTATCCATATACAAATAAAGCCTGTAAAACGTCCAGCCTCCTTTAGAACCAACTGCGCAGCAGATATATTCCCCCCGTGTTTCACGAAGAGGTCCATGGAGGAGCAGAACCTGAGTCAATTTCTTCCataaaagtgctgtttttactcaaatatttaaattgtgtaCATGCTggcatgtttatatttaatctaTTAAAAAGCAGGAATTTTGTTCAAAATTCATCTTTAAGTAAAATTCTAAATGAAGGCCTTCCAGGAGTGCAGGAACATAATGATCACTGTGCTTTcagttcatgtgtgtgtgtgctttttttacagtttggtAGCAGGCACATTGTGAGCAGGAGTGTTCACTGTTGAGCCATTTGCATTGTCctgtaaacacaaacaaacttaTTAACACAGCTGGTTGTACACTATAAAAGATTTTTCAATTACAGTGTTCTC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU33396 True 3617 lncRNA 0.35 3 39526486 39530263
Loading

Neighbor


gene id symbol gene type direction distance location
LOC103042020 LOC108432804 coding upstream 98715 39412683 ~ 39427771 (+)
LOC103043278 LOC103043278,LOC108432833 coding upstream 158193 39365807 ~ 39368293 (+)
LOC103045608 LOC108411441 coding upstream 304250 39214181 ~ 39222236 (+)
rars2 rars2 coding upstream 354531 39155626 ~ 39171955 (+)
LOC103047239 cf166,LOC103047239,LOC105017858,LOC100499587 coding upstream 373058 39147532 ~ 39153428 (+)
LOC103032515 NA coding downstream 138247 39668510 ~ 39669815 (+)
LOC103036628 NA coding downstream 164390 39694653 ~ 39697487 (+)
c3h6orf58 NA coding downstream 454882 39985145 ~ 39992197 (+)
cspp1 NA coding downstream 780678 40310941 ~ 40319844 (+)
prex2 prex2,LOC107741010,LOC107686687,LOC107758281 coding downstream 976153 40506416 ~ 40726249 (+)
G24796 rad51 non-coding upstream 87484 39436982 ~ 39439002 (+)
G24790 zc3h14,LOC107742714,LOC107685361,LOC107593284,LOC102797374 non-coding upstream 117587 39405816 ~ 39408899 (+)
G24772 tmed10 non-coding upstream 139011 39382242 ~ 39387475 (+)
G24775 NA non-coding upstream 178524 39347646 ~ 39347962 (+)
G24748 NA non-coding upstream 274643 39242442 ~ 39251843 (+)
G24833 NA non-coding downstream 91590 39621853 ~ 39626693 (+)
G24834 LOC108432800 non-coding downstream 107140 39637403 ~ 39638604 (+)
G24837 NA non-coding downstream 118125 39648388 ~ 39653019 (+)
G24978 NA non-coding downstream 315107 39845370 ~ 39848248 (+)
G24981 NA non-coding downstream 316546 39846809 ~ 39847260 (+)
eif2b2 eif2b2,LOC107697194,LOC107685362 other upstream 128608 39388867 ~ 39397878 (+)
LOC111196173 NA other upstream 185515 39325083 ~ 39340971 (+)
G24719 NA other upstream 480705 39045170 ~ 39045781 (+)
G24583 NA other upstream 579264 38939357 ~ 38947222 (+)
G24594 smim8 other upstream 599504 38925696 ~ 38926982 (+)
G24972 NA other downstream 289013 39819276 ~ 39825718 (+)
G25601 NA other downstream 2861377 42391640 ~ 42392938 (+)
fgfr1op NA other downstream 2967459 42497722 ~ 42516642 (+)
LOC103026014 LOC103026014,LOC108411425 other downstream 3729357 43259620 ~ 43262099 (+)
rps29 NA other downstream 3830206 43360469 ~ 43363444 (+)

Expression


G24815 Expression in all Baseline Samples

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G24815 Expression in each Bioproject

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G24815 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 40.
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Co-expression Network