G57813


Basic Information

Item Value
gene id G57813
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 11938378 ~ 11938639 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU65848
TCAGAATTCAATAAAAACTCAAATAAAAAAAGCAAATTTAAAAAAAAAAAAAATCAATTTTTCTCTTTTTAAAATCCCCTCACGAACTGTCACACAGCTGCTAGGCCATTTATCGACGCTCCCCTCGGTTCGCCCTTCGAAGCATGCAGCCTCCGAATTGGGACACAGCTGTAGTAGTCTCACTGAACACTTTATTTCCCATATGCACTAGGGGGCACTATAAGCCAGATACCCTTAGGTAAAATTTACTATAAGGTTCTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65848 True 262 lncRNA 0.39 1 11938378 11938639

Neighbor

gene id symbol gene type direction distance location
CI01000009_11892226_11892558 NA coding upstream 45701 11892226 ~ 11892677 (+)
CI01000009_11875722_11882183 STAT1B, STAT1 coding upstream 55457 11875486 ~ 11882921 (+)
CI01000009_11835682_11873220 STAT4 coding upstream 65048 11835682 ~ 11873330 (+)
CI01000009_11803818_11808988 SLC40A1 coding upstream 129143 11802384 ~ 11809235 (+)
CI01000009_11789703_11791511 NA coding upstream 146642 11789703 ~ 11791736 (+)
CI01000009_11993879_12004644 NEMP2 coding downstream 55005 11993644 ~ 12004765 (+)
CI01000009_12022660_12022944 NA coding downstream 83921 12022560 ~ 12023388 (+)
CI01000009_12028975_12032758 NA coding downstream 89856 12028495 ~ 12033037 (+)
CI01000009_12050866_12109305 SPEG coding downstream 112134 12050773 ~ 12110098 (+)
CI01000009_12130688_12146560 CTDS1, CTDSP1 coding downstream 192049 12130688 ~ 12146942 (+)
G57792 NA non-coding upstream 103418 11834738 ~ 11834960 (+)
G57719 NA non-coding upstream 115847 11815069 ~ 11822531 (+)
G57790 NA non-coding upstream 150594 11787576 ~ 11787784 (+)
G57789 NA non-coding upstream 151052 11786904 ~ 11787326 (+)
G57787 NA non-coding upstream 157811 11780329 ~ 11780567 (+)
G57724 NA non-coding downstream 228892 12167531 ~ 12168221 (+)
G57737 NA non-coding downstream 232724 12171363 ~ 12172140 (+)
G57850 NA non-coding downstream 249906 12188545 ~ 12188820 (+)
CI01000009_12198114_12221988 NA non-coding downstream 258766 12196699 ~ 12221993 (+)
G57704 NA non-coding downstream 367000 12305639 ~ 12372174 (+)
G57811 NA other upstream 3127 11933942 ~ 11935251 (+)
CI01000009_11761868_11765848 ORMDL1.S, ORMDL1 other upstream 171434 11761606 ~ 11766944 (+)
CI01000009_09853929_09854476 SAP18 other upstream 2081791 9853929 ~ 9856587 (+)
G56100 NA other upstream 2808092 9129300 ~ 9130286 (+)
G53651 NA other upstream 5689986 6245564 ~ 6248392 (+)
CI01000009_12432736_12435509 NA other downstream 493919 12432538 ~ 12436017 (+)
G57682 NA other downstream 886830 12825469 ~ 12892339 (+)
G57691 NA other downstream 967805 12906444 ~ 12918465 (+)
G57701 NA other downstream 1068004 13006643 ~ 13023138 (+)
G58028 NA other downstream 1201739 13140378 ~ 13143608 (+)

Expression


Co-expression Network