G24911


Basic Information

Item Value
gene id G24911
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 39499043 ~ 39499466 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU33518
CACAGTTTACAGCTTTTATTAAAAGGCTTAGAAGTAACAAGGGTTATGAGCACAAGCAGGTACAAAACCACAGAAGGATAACAGGGAGAAACCATACCATCAACGGggaacagtccagagttcatacacaggcAGGCGGTGaaagggagcaggcaaaaatcagagttgATAatacagtccaggtaatacacgaGAGTAAATCCAACACACAGGGCAAAGGCAAAAGGCAGAGTGAtaagcacagtccaggtcatacacaagataaatcCAATCAGAGGGCGAAGGCAAAAATCGAGGtcggaaaaacacagaaaaaggaTCATACACAGAATAATCAAACAATGGCAAGgaaacgctttgtaatgcaGGTAAACCAAACAATTACTCTGCGAGGAGTGAGCGTGCTCCTTAAATACTGCCGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU33518 True 424 lncRNA 0.45 1 39499043 39499466

Neighbor

gene id symbol gene type direction distance location
LOC103041222 NA coding downstream 45158 39441070 ~ 39453885 (-)
rad51 rad51 coding downstream 60000 39431663 ~ 39439043 (-)
zc3h14 zc3h14,LOC102797374 coding downstream 90125 39399006 ~ 39408918 (-)
tmed10 tmed10 coding downstream 111551 39382200 ~ 39387492 (-)
LOC103042954 NA coding downstream 137608 39356694 ~ 39361435 (-)
LOC103039762 flvcr2b,LOC108432874,LOC103039762,LOC108242486,LOC108255188,LOC107697188 coding upstream 26555 39526021 ~ 39557879 (-)
LOC103039151 LOC103039151,LOC108432876 coding upstream 63700 39563166 ~ 39565797 (-)
LOC103033783 LOC103033783 coding upstream 87017 39586483 ~ 39587636 (-)
LOC103033459 LOC103033783 coding upstream 92969 39592435 ~ 39593599 (-)
LOC111191800 LOC108432802,LOC108432823,LOC108432818 coding upstream 95570 39595036 ~ 39596254 (-)
LOC111196213 NA non-coding downstream 18699 39472824 ~ 39480344 (-)
LOC111191798 NA non-coding downstream 289778 39207480 ~ 39209265 (-)
G24860 NA non-coding downstream 310765 39187782 ~ 39188278 (-)
G24839 cf166,LOC103047239,LOC105017858,LOC100499587 non-coding downstream 345592 39147559 ~ 39153451 (-)
G24843 NA non-coding downstream 440477 39058005 ~ 39058566 (-)
LOC111196215 NA non-coding upstream 15003 39514469 ~ 39524274 (-)
G24964 NA non-coding upstream 224989 39724455 ~ 39732479 (-)
G24992 NA non-coding upstream 319810 39819276 ~ 39825981 (-)
G24997 NA non-coding upstream 345907 39845373 ~ 39848209 (-)
G25128 NA non-coding upstream 884135 40383601 ~ 40421173 (-)
G24903 NA other downstream 40854 39455236 ~ 39458189 (-)
LOC103043888 LOC108432835 other downstream 152127 39273635 ~ 39346916 (-)
batf batf,LOC107697118 other downstream 174341 39309726 ~ 39324702 (-)
smim8 smim8 other downstream 572050 38925623 ~ 38926993 (-)
LOC103024598 LOC108411439 other downstream 576126 38887626 ~ 38922917 (-)
LOC111196341 NA other upstream 675796 40175262 ~ 40230868 (-)
G25265 slco5a1 other upstream 1714955 41214421 ~ 41218829 (-)
arhgap11a NA other upstream 1936575 41436041 ~ 41442494 (-)
LOC111196508 NA other upstream 2356629 41856095 ~ 41865844 (-)
LOC111196586 LOC108262118 other upstream 2369558 41869024 ~ 41880424 (-)

Expression


Co-expression Network