G24972


Basic Information

Item Value
gene id G24972
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 39819276 ~ 39825718 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU33591
AATGTCACGTCTGCCAAGTCTCTGTTTATGTCCTCTGCCTCCTCCACGGAGCCTGGGAGCGCTCCGGCGCTAAAAGACTACAATCCCCAGAACCTTATGGACTACAAACGCGATGACGTCACGGCACACATGCCGCGACACCGTGACGTTCCCCCGGAAGTGTAATTTGTCTCCGGTGTATTTATAGACGCCGCTGCCCTTTGTTCTCTGCCGCGTATTGCCTTTTCGTGCATACAAAGCGTTACTCTGTGTTTATTCCTGATCTCCTGTGTTTTTTGACCTTGCTCTCGTTTTTTGACTACCCCTTTTTGGATTTGCCTATTATATTGCTGTTActggtttctgaactctgccCTGGACTTTATACTTCTCTTTTGTCTCACCTCTGATACTGTTGCTGCCTGGATTCGACCCTGGACTGTTTGGTATGTGCTTAGCTTGTCTTTATACTGTTAGGTTTAGCTCATTGTATATAGTTGTTGTAAAATAAAACTTGTACAGTACCACGTCTGCGTTTGTCTCTGATCTGCCTGGCTTGCCTGACAATAAAGATGACAATGGCAAGATGATAATTGTAAGGATGGTGGCGAGGAAGGAGAAGGcgaggatgatgatgaggaaGGCAAGGATGATGATGACAGGGGCAGGAGCTTCTGTGAGGCATGGCGTGGGAGACAGGAAGCCAGACAGGAAGCTGTTGACAGGGCAGCAGGGGCCAGGGGTGTGGCTTAGGAAGTAGGAAAAAAGCAGAGGCTTAGCCGAGGGAGGCTGGTGGGCAGACGGCAGATGAGGAGGGATAATGGGGGATGATGGTGGGATGATGGGAGGTGGGTTGAGAAGATGGACAGACTGATGCAGGGATGATGGGGAAGATGGGATTATGGGTAGGgaggacggacagacagactgatgtATGGATGATTAAGGATGGGTAGTGTGGACGGACAGACTGATGTAGTGATGATGGGGAAGGAGGCAAAGACAATGGCAGCAACGGCGATGGCAATGATAAAGGTGAGTATGGTGAGGATGATCGCAAGGACAGATGGAAAAGATCATGGTGAAGGAGATGAAGGCGGGGGAAGTGCAGGTGCTGAAGATGCAAGCAAGAAGATGGCAGCGATGGTGATGATAAAAGCGGcaaagatgatgatgaaggcgatgatgatgatgaaggcgatgatgatgatagtggtgATGTAGGGAAAGATGATGGAGATGGCAGTGATGAAGGTGATGACGGTTATGATGACAATGATGATAACAGTGATGATGGCGACAATAAGGCGAGGATGATGACAGCGCTAATGGTGGCAATGATGGCAATGATGTGGCAGCGATAATTACAATGACAATGATGACGATGGCGAGGACTGTGGGAATAATGATGGCAAAGAGAATGGCAAAGGTGATGATGG

Function

NR:

description
ORF2 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU33591 True 1418 TUCP 0.49 2 39819276 39825718

Neighbor

gene id symbol gene type direction distance location
LOC103036628 NA coding upstream 121789 39694653 ~ 39697487 (+)
LOC103032515 NA coding upstream 149461 39668510 ~ 39669815 (+)
LOC103042020 LOC108432804 coding upstream 391505 39412683 ~ 39427771 (+)
LOC103043278 LOC103043278,LOC108432833 coding upstream 450983 39365807 ~ 39368293 (+)
LOC103045608 LOC108411441 coding upstream 597040 39214181 ~ 39222236 (+)
c3h6orf58 NA coding downstream 159427 39985145 ~ 39992197 (+)
cspp1 NA coding downstream 485223 40310941 ~ 40319844 (+)
prex2 prex2,LOC107741010,LOC107686687,LOC107758281 coding downstream 680698 40506416 ~ 40726249 (+)
c3h8orf34 cunh8orf34,LOC103047203,LOC106909367 coding downstream 905669 40731387 ~ 40903436 (+)
sulf1 sulf1 coding downstream 1096754 40922472 ~ 41115241 (+)
G24837 NA non-coding upstream 166257 39648388 ~ 39653019 (+)
G24834 LOC108432800 non-coding upstream 180672 39637403 ~ 39638604 (+)
G24833 NA non-coding upstream 192583 39621853 ~ 39626693 (+)
G24815 NA non-coding upstream 289013 39526486 ~ 39530263 (+)
G24796 rad51 non-coding upstream 380274 39436982 ~ 39439002 (+)
G24978 NA non-coding downstream 19652 39845370 ~ 39848248 (+)
G24981 NA non-coding downstream 21091 39846809 ~ 39847260 (+)
G25021 NA non-coding downstream 166983 39992701 ~ 39994485 (+)
G25024 themis non-coding downstream 178455 40004173 ~ 40013801 (+)
G25142 NA non-coding downstream 669298 40495016 ~ 40495230 (+)
eif2b2 eif2b2,LOC107697194,LOC107685362 other upstream 421398 39388867 ~ 39397878 (+)
LOC111196173 NA other upstream 478305 39325083 ~ 39340971 (+)
G24719 NA other upstream 773495 39045170 ~ 39045781 (+)
G24583 NA other upstream 872054 38939357 ~ 38947222 (+)
G24594 smim8 other upstream 892294 38925696 ~ 38926982 (+)
G25601 NA other downstream 2565922 42391640 ~ 42392938 (+)
fgfr1op NA other downstream 2672004 42497722 ~ 42516642 (+)
LOC103026014 LOC103026014,LOC108411425 other downstream 3433902 43259620 ~ 43262099 (+)
rps29 NA other downstream 3534751 43360469 ~ 43363444 (+)
G25879 NA other downstream 3596053 43421771 ~ 43422046 (+)

Expression


Co-expression Network