Gene
RNA
| Item | Value |
|---|---|
| gene id | G24978 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035899.1 |
| NCBI id | CM008302.1 |
| chromosome length | 74127438 |
| location | 39845370 ~ 39848248 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU33602 | True | 290 | lncRNA | 0.45 | 2 | 39845370 | 39848248 |
| TU33603 | False | 290 | lncRNA | 0.39 | 2 | 39845370 | 39848248 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC103036628 | NA | coding | upstream | 147883 | 39694653 ~ 39697487 (+) |
| LOC103032515 | NA | coding | upstream | 175555 | 39668510 ~ 39669815 (+) |
| LOC103042020 | LOC108432804 | coding | upstream | 417599 | 39412683 ~ 39427771 (+) |
| LOC103043278 | LOC103043278,LOC108432833 | coding | upstream | 477077 | 39365807 ~ 39368293 (+) |
| LOC103045608 | LOC108411441 | coding | upstream | 623134 | 39214181 ~ 39222236 (+) |
| c3h6orf58 | NA | coding | downstream | 136897 | 39985145 ~ 39992197 (+) |
| cspp1 | NA | coding | downstream | 462693 | 40310941 ~ 40319844 (+) |
| prex2 | prex2,LOC107741010,LOC107686687,LOC107758281 | coding | downstream | 658168 | 40506416 ~ 40726249 (+) |
| c3h8orf34 | cunh8orf34,LOC103047203,LOC106909367 | coding | downstream | 883139 | 40731387 ~ 40903436 (+) |
| sulf1 | sulf1 | coding | downstream | 1074224 | 40922472 ~ 41115241 (+) |
| G24837 | NA | non-coding | upstream | 192351 | 39648388 ~ 39653019 (+) |
| G24834 | LOC108432800 | non-coding | upstream | 206766 | 39637403 ~ 39638604 (+) |
| G24833 | NA | non-coding | upstream | 218677 | 39621853 ~ 39626693 (+) |
| G24815 | NA | non-coding | upstream | 315107 | 39526486 ~ 39530263 (+) |
| G24796 | rad51 | non-coding | upstream | 406368 | 39436982 ~ 39439002 (+) |
| G25021 | NA | non-coding | downstream | 144453 | 39992701 ~ 39994485 (+) |
| G25024 | themis | non-coding | downstream | 155925 | 40004173 ~ 40013801 (+) |
| G25142 | NA | non-coding | downstream | 646768 | 40495016 ~ 40495230 (+) |
| G25240 | NA | non-coding | downstream | 1273048 | 41121296 ~ 41121553 (+) |
| G25243 | NA | non-coding | downstream | 1298305 | 41146553 ~ 41147637 (+) |
| G24972 | NA | other | upstream | 19652 | 39819276 ~ 39825718 (+) |
| eif2b2 | eif2b2,LOC107697194,LOC107685362 | other | upstream | 447492 | 39388867 ~ 39397878 (+) |
| LOC111196173 | NA | other | upstream | 504399 | 39325083 ~ 39340971 (+) |
| G24719 | NA | other | upstream | 799589 | 39045170 ~ 39045781 (+) |
| G24583 | NA | other | upstream | 898148 | 38939357 ~ 38947222 (+) |
| G25601 | NA | other | downstream | 2543392 | 42391640 ~ 42392938 (+) |
| fgfr1op | NA | other | downstream | 2649474 | 42497722 ~ 42516642 (+) |
| LOC103026014 | LOC103026014,LOC108411425 | other | downstream | 3411372 | 43259620 ~ 43262099 (+) |
| rps29 | NA | other | downstream | 3512221 | 43360469 ~ 43363444 (+) |
| G25879 | NA | other | downstream | 3573523 | 43421771 ~ 43422046 (+) |
