G25351


Basic Information

Item Value
gene id G25351
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 41485489 ~ 41486268 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU34062
GTTCatgaataaaaaggaaaagacaTGTTTTCATTGAGACTTTGGTTAAGCAAAAATACATGACTACATCAGTTTCTACATCTAACatttcagcagtgtgtgttgtgtgtgtgtgtgtttctctcacaGGTTTGTAGGTCAGCTGTACTGGAGGATTTGCTGGCCTTTGACCTCTTTCGTAAAAGTTTCCTGTCTTCCCAGAACCCCTCACCCCAACTCCAGCTCCATCAGACAAAGATCTGAcagaacaaagagaaaaaaaaccccacaaagATCATCATCTAGACAGCTCCTATTTTCTTTACCCAGtggaaataataatacagatgttaatattactaatatcctacattataatttaatatgaaAGAGTAACTCTTATCTCACATGTTAACTTCTGACACATTTTATAATGGACTTTATAATAGATCCGCACTAACAGCAACAGGACAAAGACGTTCTTTGTTGCAATGAAATCGTGTGCCTGTCTCCCCCTAGCGGTACATCACTGAACTACAGTCAATGGTAAACTGTAGTTTAACCATtaatcacagcacagcacatgCTATTGGGAAGCTTTGATATACaactttggaaaaaattaagagaccacttacgtTTCTGGATCAGTTGCTCTGATTTTgacatttataggtatatgtttgagtaaaatgaacattgttgttttattctataaactactgacaacatttctcccaaattccaaataaaaatattgtctattacagcatttatttgcagaaaattagaaattagaga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU34062 True 780 lncRNA 0.35 1 41485489 41486268

Neighbor

gene id symbol gene type direction distance location
fmn1 fmn1 coding upstream 57319 41403996 ~ 41428170 (+)
aven NA coding upstream 205552 41254714 ~ 41279937 (+)
emc7 emc7,LOC107549094,LOC107671783,LOC107756596,LOC107721381,LOC107601948 coding upstream 235918 41244537 ~ 41249571 (+)
katnbl1 katnbl1 coding upstream 243141 41236256 ~ 41242348 (+)
slco5a1 slco5a1,LOC107741005,LOC107686683,LOC108256392,LOC107695420,LOC107584939,LOC107758302 coding upstream 269339 41122279 ~ 41216150 (+)
ywhaq ywhaq,LOC107721301,LOC107549101,LOC107756586,LOC107668239 coding downstream 47837 41534105 ~ 41545497 (+)
LOC103041996 LOC108410928 coding downstream 61706 41547974 ~ 41567160 (+)
LOC103038512 asap2,LOC108410950,LOC108257785,LOC105894440 coding downstream 102484 41588752 ~ 41621272 (+)
LOC103039741 mboat2b,LOC103039741,LOC108410960,LOC108257786,LOC107668249,LOC107601827,LOC107693237,LOC107756580,LOC106607658 coding downstream 148687 41634955 ~ 41705390 (+)
kidins220 LOC103040274,LOC108410983,LOC108258057 coding downstream 222502 41708770 ~ 41733546 (+)
G25339 NA non-coding upstream 42950 41439812 ~ 41442539 (+)
G25287 NA non-coding upstream 188801 41293464 ~ 41296688 (+)
G25251 NA non-coding upstream 262004 41222118 ~ 41223485 (+)
G25243 NA non-coding upstream 337852 41146553 ~ 41147637 (+)
G25240 NA non-coding upstream 363936 41121296 ~ 41121553 (+)
G25355 NA non-coding downstream 9598 41495866 ~ 41497739 (+)
LOC111196462 NA non-coding downstream 21720 41507988 ~ 41519295 (+)
G25407 NA non-coding downstream 90015 41576283 ~ 41577638 (+)
G25426 NA non-coding downstream 101831 41588099 ~ 41588458 (+)
G25428 NA non-coding downstream 138513 41624781 ~ 41632161 (+)
G24972 NA other upstream 1659771 39819276 ~ 39825718 (+)
eif2b2 eif2b2,LOC107697194,LOC107685362 other upstream 2087611 39388867 ~ 39397878 (+)
LOC111196173 NA other upstream 2144518 39325083 ~ 39340971 (+)
G24719 NA other upstream 2439708 39045170 ~ 39045781 (+)
G24583 NA other upstream 2538267 38939357 ~ 38947222 (+)
G25601 NA other downstream 905372 42391640 ~ 42392938 (+)
fgfr1op NA other downstream 1011454 42497722 ~ 42516642 (+)
LOC103026014 LOC103026014,LOC108411425 other downstream 1773352 43259620 ~ 43262099 (+)
rps29 NA other downstream 1874201 43360469 ~ 43363444 (+)
G25879 NA other downstream 1935503 43421771 ~ 43422046 (+)

Expression


Co-expression Network