G25473


Basic Information

Item Value
gene id G25473
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 41717221 ~ 41717780 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU34218
AACAGGCAGCGCTCGTGTGGTCTGCTCAGGCAGCTCTGGAGGGTTAACAAACATGAGTTTCAGCAGTAACTCAAGGTAACCAATGTGGCGGGCGAGCCGAGTACTTAGAACCCAGGCCCAGTTCCAGCTCTCACCCTCACGCCTGCTCCCAAAGTACACAACCACTAAAAAACACATAAAGCAGAGCCAGAAGGCTAAGGGAGACAGCGATAGCCAGTTTGGGGTCCACAGTGAAGCCGAGCAGCAGAGCCACAGAGCCACAAAGCATAAGAGACAGGAACACCACTAGCCAAGAGAACTGAAACAGAGGCTCAATCTGCTGCCCTGCAAATGTCTTCATCTCATCTTAAAaagggag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU34218 True 358 lncRNA 0.52 2 41717221 41717780

Neighbor

gene id symbol gene type direction distance location
LOC103038827 LOC108410973 coding downstream 85057 41620999 ~ 41632164 (-)
cpsf3 cpsf3,LOC107756584,LOC107693240,LOC107668237,LOC107549104,LOC107601862 coding downstream 139961 41567196 ~ 41577260 (-)
taf1b NA coding downstream 219111 41489377 ~ 41498110 (-)
klf11 klf11,LOC108410427 coding downstream 243470 41469369 ~ 41473751 (-)
rrm2 rrm2,LOC107668265 coding downstream 251520 41459608 ~ 41465701 (-)
LOC103041202 NA coding upstream 16801 41734581 ~ 41738023 (-)
LOC103030723 rnf144ab,LOC108411012,LOC107549108,LOC107693234,LOC107601775,LOC107668259,LOC107721372 coding upstream 167795 41885575 ~ 41911776 (-)
sox11 sox11b,LOC108411020,LOC107756575,LOC107668258,LOC107601767,LOC108258189 coding upstream 341050 42058830 ~ 42061451 (-)
allc allc coding upstream 582089 42299869 ~ 42307990 (-)
rps7 rps7,LOC107668222,LOC107601753,LOC107726469 coding upstream 592570 42310350 ~ 42316742 (-)
G25367 ywhaq,LOC107721301,LOC107549101,LOC107756586,LOC107668239 non-coding downstream 171720 41533919 ~ 41545501 (-)
G25400 NA non-coding downstream 177603 41538183 ~ 41539618 (-)
G25381 NA non-coding downstream 310434 41404010 ~ 41406787 (-)
LOC111196423 NA non-coding downstream 314527 41402021 ~ 41402694 (-)
G25272 emc7,LOC107549094,LOC107671783,LOC107756596,LOC107721381,LOC107601948 non-coding downstream 467568 41244692 ~ 41249653 (-)
G25472 kidins220b,LOC103040274,LOC108258057 non-coding upstream 1872 41719652 ~ 41729250 (-)
G25474 NA non-coding upstream 12051 41729831 ~ 41730469 (-)
G25491 NA non-coding upstream 61515 41779295 ~ 41779582 (-)
LOC111191902 NA non-coding upstream 206364 41924144 ~ 41927385 (-)
G25528 NA non-coding upstream 238752 41956532 ~ 41956907 (-)
arhgap11a NA other downstream 274727 41436041 ~ 41442494 (-)
G25265 slco5a1 other downstream 498392 41214421 ~ 41218829 (-)
LOC111196341 NA other downstream 1486353 40175262 ~ 40230868 (-)
G24903 NA other downstream 2259032 39455236 ~ 39458189 (-)
batf batf,LOC107697118 other downstream 2392519 39309726 ~ 39324702 (-)
LOC111196508 NA other upstream 138315 41856095 ~ 41865844 (-)
LOC111196586 LOC108262118 other upstream 151244 41869024 ~ 41880424 (-)
G25678 NA other upstream 999886 42717666 ~ 42718389 (-)
G25785 NA other upstream 1381042 43098822 ~ 43111401 (-)
LOC103027084 LOC108416115,LOC103358919 other upstream 1777639 43495419 ~ 43517157 (-)

Expression


Co-expression Network