G25492


Basic Information

Item Value
gene id G25492
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 41865251 ~ 41865609 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU34241
AACTGTTTTACTCATGCTCATCTactacaaagaaaaacaacataCCGGAGCAGGTAATGTGAGTCACCTCACTGCTTCTATCACAATTGTTCTGACTCCAGGATGAAGATGGACAGTGAAACAGAGTAGAGTCATGTTTCCTACATTTTACATCATCCAGCCAGTTAGGAGCTGATTCCACTCGTGCTTTGGTAGCTCTCTCAGTCTTAAATCTTCCACAGTTCAGCTCCCGACAGATCCATCCCATTGTTACACACATTCCCCCAGGTTCCATTATAGAACACCTCCAGATTCCCCTCACAGCCCTCAGTCAGTCTGATCTCTTTATACTCTGATGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU34241 True 339 lncRNA 0.38 2 41865251 41865609

Neighbor

gene id symbol gene type direction distance location
kidins220 LOC103040274,LOC108410983,LOC108258057 coding upstream 131705 41708770 ~ 41733546 (+)
LOC103039741 mboat2b,LOC103039741,LOC108410960,LOC108257786,LOC107668249,LOC107601827,LOC107693237,LOC107756580,LOC106607658 coding upstream 159861 41634955 ~ 41705390 (+)
LOC103038512 asap2,LOC108410950,LOC108257785,LOC105894440 coding upstream 243979 41588752 ~ 41621272 (+)
LOC103041996 LOC108410928 coding upstream 298091 41547974 ~ 41567160 (+)
ywhaq ywhaq,LOC107721301,LOC107549101,LOC107756586,LOC107668239 coding upstream 319754 41534105 ~ 41545497 (+)
rnaseh1 LOC107693208 coding downstream 451914 42317523 ~ 42326404 (+)
LOC103042546 LOC108411077 coding downstream 538311 42403920 ~ 42496318 (+)
LOC103034213 NA coding downstream 651123 42516732 ~ 42524073 (+)
acbd3 acbd3,LOC107549117,LOC107732644,LOC107726445,LOC107601671,LOC107668205 coding downstream 673733 42539342 ~ 42551073 (+)
LOC103035072 NA coding downstream 690272 42555881 ~ 42716312 (+)
G25459 NA non-coding upstream 129541 41734587 ~ 41735710 (+)
G25458 NA non-coding upstream 131047 41734003 ~ 41734204 (+)
G25428 NA non-coding upstream 233090 41624781 ~ 41632161 (+)
G25426 NA non-coding upstream 276793 41588099 ~ 41588458 (+)
G25407 NA non-coding upstream 287613 41576283 ~ 41577638 (+)
LOC111196599 NA non-coding downstream 164471 42030080 ~ 42051485 (+)
LOC111196607 NA non-coding downstream 196315 42061924 ~ 42115521 (+)
G25560 NA non-coding downstream 330774 42196383 ~ 42196653 (+)
G25577 NA non-coding downstream 455302 42320911 ~ 42322260 (+)
G25602 NA non-coding downstream 531393 42397002 ~ 42397298 (+)
G24972 NA other upstream 2039533 39819276 ~ 39825718 (+)
eif2b2 eif2b2,LOC107697194,LOC107685362 other upstream 2467373 39388867 ~ 39397878 (+)
LOC111196173 NA other upstream 2524280 39325083 ~ 39340971 (+)
G24719 NA other upstream 2819470 39045170 ~ 39045781 (+)
G24583 NA other upstream 2918029 38939357 ~ 38947222 (+)
G25601 NA other downstream 526031 42391640 ~ 42392938 (+)
fgfr1op NA other downstream 632113 42497722 ~ 42516642 (+)
LOC103026014 LOC103026014,LOC108411425 other downstream 1394011 43259620 ~ 43262099 (+)
rps29 NA other downstream 1494860 43360469 ~ 43363444 (+)
G25879 NA other downstream 1556162 43421771 ~ 43422046 (+)

Expression


Co-expression Network