G25559


Basic Information

Item Value
gene id G25559
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 42195007 ~ 42195290 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU34336
cgcagcggccgctccgggtccgttaaatggtgcttttgtgttactatttgtcgttttttccgtttatttcctgcaaatatgtgcatcggaacacccgtgcacatgttctaccaccgccagaccctgctacagtggagaaatcagccagaaaacacgctaccggacgaggttctgcagacgctacttgagcttagcctgctaagagacccaggccgccagcccgcggtgtttcctgacgccggagcccagcggaagtgccatcgcaagcggtgcgagcggaagcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU34336 True 284 lncRNA 0.34 1 42195007 42195290

Neighbor

gene id symbol gene type direction distance location
sox11 sox11b,LOC108411020,LOC107756575,LOC107668258,LOC107601767,LOC108258189 coding downstream 133556 42058830 ~ 42061451 (-)
LOC103030723 rnf144ab,LOC108411012,LOC107549108,LOC107693234,LOC107601775,LOC107668259,LOC107721372 coding downstream 283231 41885575 ~ 41911776 (-)
LOC103041202 NA coding downstream 456984 41734581 ~ 41738023 (-)
LOC103038827 LOC108410973 coding downstream 562843 41620999 ~ 41632164 (-)
cpsf3 cpsf3,LOC107756584,LOC107693240,LOC107668237,LOC107549104,LOC107601862 coding downstream 617747 41567196 ~ 41577260 (-)
allc allc coding upstream 104579 42299869 ~ 42307990 (-)
rps7 rps7,LOC107668222,LOC107601753,LOC107726469 coding upstream 115060 42310350 ~ 42316742 (-)
LOC103036422 LOC103036422,LOC108411258 coding upstream 524259 42719549 ~ 42727065 (-)
kif25 kif25,LOC107602573,LOC105010024 coding upstream 533136 42728426 ~ 42744729 (-)
acat2 acat2,LOC107732634,LOC107549121,LOC107693222,LOC107696107 coding upstream 551184 42746474 ~ 42751642 (-)
LOC111196609 NA non-coding downstream 118286 42072053 ~ 42076721 (-)
G25528 NA non-coding downstream 238100 41956532 ~ 41956907 (-)
LOC111191902 NA non-coding downstream 267622 41924144 ~ 41927385 (-)
G25491 NA non-coding downstream 415425 41779295 ~ 41779582 (-)
G25474 NA non-coding downstream 464538 41729831 ~ 41730469 (-)
G25578 NA non-coding upstream 122255 42317545 ~ 42324732 (-)
G25579 NA non-coding upstream 129544 42324834 ~ 42326352 (-)
G25607 NA non-coding upstream 201520 42396810 ~ 42397036 (-)
G25628 NA non-coding upstream 316207 42511497 ~ 42516748 (-)
G25642 acbd3,LOC107601671,LOC107726445,LOC107668205 non-coding upstream 347346 42542636 ~ 42544717 (-)
LOC111196586 LOC108262118 other downstream 314583 41869024 ~ 41880424 (-)
LOC111196508 NA other downstream 329163 41856095 ~ 41865844 (-)
arhgap11a NA other downstream 752513 41436041 ~ 41442494 (-)
G25265 slco5a1 other downstream 976178 41214421 ~ 41218829 (-)
LOC111196341 NA other downstream 1964139 40175262 ~ 40230868 (-)
G25678 NA other upstream 522376 42717666 ~ 42718389 (-)
G25785 NA other upstream 903532 43098822 ~ 43111401 (-)
LOC103027084 LOC108416115,LOC103358919 other upstream 1300129 43495419 ~ 43517157 (-)
G25967 mcm3l,LOC108416133,LOC108258154,LOC107697457 other upstream 1479735 43675025 ~ 43678862 (-)
cbr4 cbr4,LOC107597475,LOC107665353 other upstream 1695339 43890629 ~ 43899760 (-)

Expression


Co-expression Network