G25577


Basic Information

Item Value
gene id G25577
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 42320911 ~ 42322260 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU34376
acactcccgccgactgcgctcatgcagtggctatctctatttaaatgaataggatgcgctgtgttggtgccgcgccatttgcgtagcgcgctgcgctatttgcgtagcgcgcgcgggagggatcgtcgatcctctttttgacttcgatactcgagatcgtgacctcatttcgattcgatttcgataaaatatcgagatcgtgacacccctattatGAACGGTATAGAAGCCACCGGCATCATGCACTAATGTTGCTGTGTAACTGCCAAGACGGACCAAGACTCGATTAAGTTTTGCTGTATGTTATCCATTTAATCttggataactttatgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU34376 True 333 lncRNA 0.48 2 42320911 42322260

Neighbor

gene id symbol gene type direction distance location
kidins220 LOC103040274,LOC108410983,LOC108258057 coding upstream 587365 41708770 ~ 41733546 (+)
LOC103039741 mboat2b,LOC103039741,LOC108410960,LOC108257786,LOC107668249,LOC107601827,LOC107693237,LOC107756580,LOC106607658 coding upstream 615521 41634955 ~ 41705390 (+)
LOC103038512 asap2,LOC108410950,LOC108257785,LOC105894440 coding upstream 699639 41588752 ~ 41621272 (+)
LOC103041996 LOC108410928 coding upstream 753751 41547974 ~ 41567160 (+)
ywhaq ywhaq,LOC107721301,LOC107549101,LOC107756586,LOC107668239 coding upstream 775414 41534105 ~ 41545497 (+)
LOC103042546 LOC108411077 coding downstream 81660 42403920 ~ 42496318 (+)
LOC103034213 NA coding downstream 194472 42516732 ~ 42524073 (+)
acbd3 acbd3,LOC107549117,LOC107732644,LOC107726445,LOC107601671,LOC107668205 coding downstream 217082 42539342 ~ 42551073 (+)
LOC103035072 NA coding downstream 233621 42555881 ~ 42716312 (+)
sod2 sod2,LOC107732630 coding downstream 440154 42762414 ~ 42766097 (+)
G25560 NA non-coding upstream 124258 42196383 ~ 42196653 (+)
LOC111196607 NA non-coding upstream 205390 42061924 ~ 42115521 (+)
LOC111196599 NA non-coding upstream 269426 42030080 ~ 42051485 (+)
G25493 LOC108262118 non-coding upstream 450904 41855959 ~ 41870007 (+)
G25492 NA non-coding upstream 455302 41865251 ~ 41865609 (+)
G25602 NA non-coding downstream 74742 42397002 ~ 42397298 (+)
G25624 NA non-coding downstream 181521 42503781 ~ 42505297 (+)
G25625 NA non-coding downstream 197381 42519641 ~ 42519942 (+)
G25650 NA non-coding downstream 283641 42605901 ~ 42606128 (+)
G25647 NA non-coding downstream 395398 42717658 ~ 42718389 (+)
G24972 NA other upstream 2495193 39819276 ~ 39825718 (+)
eif2b2 eif2b2,LOC107697194,LOC107685362 other upstream 2923033 39388867 ~ 39397878 (+)
LOC111196173 NA other upstream 2979940 39325083 ~ 39340971 (+)
G24719 NA other upstream 3275130 39045170 ~ 39045781 (+)
G24583 NA other upstream 3373689 38939357 ~ 38947222 (+)
G25601 NA other downstream 69380 42391640 ~ 42392938 (+)
fgfr1op NA other downstream 175462 42497722 ~ 42516642 (+)
LOC103026014 LOC103026014,LOC108411425 other downstream 937360 43259620 ~ 43262099 (+)
rps29 NA other downstream 1038209 43360469 ~ 43363444 (+)
G25879 NA other downstream 1099511 43421771 ~ 43422046 (+)

Expression


Co-expression Network