G25777


Basic Information

Item Value
gene id G25777
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 43061698 ~ 43127333 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU34635
ctaaataaaatcaactaaaactagaaaTCAAGGCTTTATAAAAATCTTGGGAACTGAATAAAGTCAGAATcataatttcttaataaatagcacaccgcagaaaattaaagtggcaggtaaaataatatagccaCAAGCGGTGATGCAAAAGTTAAAGCAAAAGtaacccaagaaagcccagTACATCAACATGGAACCATTCCTGAGACAAAAGCCACATTATGTGTAGTTTGTGCAGAGTTTAAAACTTTGGGCCCTGATATTCTATCAATCAGTGTGGAGATGAATGGGAGAATAGAGCAGCTGATCATTAAAACTTTGCATGGAGatataaaaaaaaaaa

Function

GO:

id name namespace
GO:0048884 neuromast development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU34635 True 343 lncRNA 0.45 2 43061698 43127333

Neighbor

gene id symbol gene type direction distance location
c3h2orf70 NA coding downstream 163215 42895773 ~ 42898483 (-)
fndc1 fndc1,LOC107549078 coding downstream 170626 42826068 ~ 42891072 (-)
wtap wtap,LOC107696108,LOC107601562,LOC107726473,LOC107549122 coding downstream 301708 42752009 ~ 42759990 (-)
acat2 acat2,LOC107732634,LOC107549121,LOC107693222,LOC107696107 coding downstream 310056 42746474 ~ 42751642 (-)
kif25 kif25,LOC107602573,LOC105010024 coding downstream 316969 42728426 ~ 42744729 (-)
slc25a29 slc25a29,LOC107678310,LOC107557018,LOC107728117,LOC108257962,LOC107564594 coding upstream 52094 43179427 ~ 43189359 (-)
LOC103025090 ppp2r5cb,ppp2r5c,LOC103025090,LOC108411434,LOC107704375,LOC108257814,LOC104924693,LOC103369946,LOC100694131,LOC101473650 coding upstream 168126 43295459 ~ 43326032 (-)
LOC103024139 LOC107100300,LOC107378075,LOC108257811 coding upstream 201274 43328607 ~ 43336669 (-)
LOC103024454 hsp90aa1.1,LOC103024454,LOC108411468,LOC108257813,LOC107704377,LOC107557012,LOC107564585 coding upstream 209514 43336847 ~ 43341516 (-)
mgat2 mgat2,LOC107728126,LOC107564584,LOC107704380 coding upstream 223560 43350893 ~ 43356000 (-)
G25769 pdia6 non-coding downstream 14112 43046102 ~ 43047586 (-)
G25739 NA non-coding downstream 28256 43031678 ~ 43033442 (-)
G25718 NA non-coding downstream 144962 42916061 ~ 42916736 (-)
G25697 NA non-coding downstream 237586 42823485 ~ 42824112 (-)
G25691 NA non-coding downstream 257557 42801755 ~ 42804141 (-)
G25797 LOC108411385 non-coding upstream 33088 43160421 ~ 43171214 (-)
G25802 myh6,LOC103031694,LOC102786665,LOC780532,LOC108251423 non-coding upstream 45640 43172973 ~ 43179219 (-)
G25874 NA non-coding upstream 233155 43360488 ~ 43363090 (-)
G25902 NA non-coding upstream 334336 43461669 ~ 43462154 (-)
G25903 NA non-coding upstream 356756 43484089 ~ 43484368 (-)
G25678 NA other downstream 343309 42717666 ~ 42718389 (-)
LOC111196586 LOC108262118 other downstream 1181274 41869024 ~ 41880424 (-)
LOC111196508 NA other downstream 1195854 41856095 ~ 41865844 (-)
arhgap11a NA other downstream 1619204 41436041 ~ 41442494 (-)
G25265 slco5a1 other downstream 1842869 41214421 ~ 41218829 (-)
LOC103027084 LOC108416115,LOC103358919 other upstream 368086 43495419 ~ 43517157 (-)
G25967 mcm3l,LOC108416133,LOC108258154,LOC107697457 other upstream 547692 43675025 ~ 43678862 (-)
cbr4 cbr4,LOC107597475,LOC107665353 other upstream 763296 43890629 ~ 43899760 (-)
fkbp1b fkbp1b other upstream 1641931 44769264 ~ 44799505 (-)
ubxn2a ubxn2a,LOC107603085,LOC107750080,LOC107697178 other upstream 1728766 44856099 ~ 44870690 (-)

Expression


Co-expression Network