G25879


Basic Information

Item Value
gene id G25879
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 43421771 ~ 43422046 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU34766
tcttgttaaagactgtaagtgagtggcaagcctgtttaataaaagagcttatGAGCGTTcatcatgagtctcacgggtcttccttcctcttccacgccacatttggtgtcagaagtgaccctgctggaagatattgagctgcTGGCAGGGGAAATCGAACGGCTGAGGAGGAAGACAGCGGACCAACGGACTAGAGGCAAGGCTCTCCAGCGGAGTGGACTCGGACCTGACGGCGCCAGCGGGCTGTTCGGAGGTCGTGGCCGGGGAGAGGACGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU34766 True 276 TUCP 0.45 1 43421771 43422046

Neighbor

gene id symbol gene type direction distance location
LOC103031694 myh6,LOC103031694,LOC102786665,LOC108251423,LOC780532 coding upstream 242552 43172940 ~ 43179219 (+)
LOC103030407 LOC108411385 coding upstream 250536 43136783 ~ 43171235 (+)
LOC103030938 NA coding upstream 286383 43115778 ~ 43135388 (+)
LOC103031260 NA coding upstream 310583 43092165 ~ 43111188 (+)
LOC103041928 pdia6,LOC108411347,LOC107732640,LOC107693218,LOC107549125 coding upstream 369884 43044192 ~ 43051887 (+)
LOC103026793 adcy1a,LOC108416099,LOC108257925,LOC107708029,LOC107697434,LOC107559745,LOC107581454,LOC107687179 coding downstream 6417 43428463 ~ 43458757 (+)
LOC103027693 mcm3l,LOC108416133,LOC107712296,LOC108258154,LOC107697457 coding downstream 252955 43675001 ~ 43688806 (+)
LOC103035929 palld,LOC107665352 coding downstream 299716 43721762 ~ 43883044 (+)
trmt1l trmt1l,LOC107698377 coding downstream 477756 43899802 ~ 43909913 (+)
LOC103028025 NA coding downstream 489787 43911833 ~ 43943410 (+)
G25834 mgat2,LOC107728126,LOC107564584,LOC107704380 non-coding upstream 65744 43350895 ~ 43356027 (+)
G25828 hsp90aa1.1,LOC108411456,LOC101068853,LOC103369947,LOC108231826,LOC105919227,LOC102218115,LOC103457915,LOC103024454,LOC108257813,LOC108411468,LOC107704347,LOC107557012 non-coding upstream 80042 43329527 ~ 43341729 (+)
G25662 wtap,LOC107696108,LOC107601562,LOC107726473,LOC107549122 non-coding upstream 661800 42753358 ~ 42759971 (+)
G25657 NA non-coding upstream 692262 42727634 ~ 42729509 (+)
G25647 NA non-coding upstream 703382 42717658 ~ 42718389 (+)
LOC111191905 NA non-coding downstream 41554 43463600 ~ 43465928 (+)
G25888 NA non-coding downstream 62049 43484095 ~ 43484399 (+)
G25893 NA non-coding downstream 94752 43516798 ~ 43517094 (+)
G25914 NA non-coding downstream 173992 43596038 ~ 43644026 (+)
G25925 NA non-coding downstream 244575 43666621 ~ 43673719 (+)
rps29 NA other upstream 58327 43360469 ~ 43363444 (+)
LOC103026014 LOC103026014,LOC108411425 other upstream 159672 43259620 ~ 43262099 (+)
fgfr1op NA other upstream 905129 42497722 ~ 42516642 (+)
G25601 NA other upstream 1028833 42391640 ~ 42392938 (+)
G24972 NA other upstream 3596053 39819276 ~ 39825718 (+)
G25880 NA other downstream 2346 43424392 ~ 43424906 (+)
LOC103033920 LOC108416105 other downstream 68277 43490323 ~ 43494316 (+)
fau fau,LOC108411505,LOC107704371 other downstream 3106322 46528368 ~ 46549553 (+)
G26915 NA other downstream 4856221 48278267 ~ 48315894 (+)
G26995 NA other downstream 5133751 48555797 ~ 48641905 (+)

Expression


Co-expression Network