G25934



Basic Information


Item Value
gene id G25934
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 43703183 ~ 43703697 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence


>TU34829
cctgtccttaaaatacctccctcatacctgttctcccctgcttgcagacgcTGACATACGTTTTCGGGCGCCGGTCGTTGCCGCGTGGCTTCATGGTGTTTCTGCCATTTGTCATTGCCTGCTCTCAGTTTGCCGTTTTCGCCCGTCTGCGTGGCTGCTCGTTCGTAGTTGGCTCGATTTCCTGCTCGTAGGATCCATGTTGGTTTGTATTGCTCTCTGTTCTGTCGCTGGCGTTTTGGTTGGATCCTCGCTGTGTTTGCTGTTGGCGGTCTGGGTTCCTGTTTTGCTGGATCACGTGACGTGTCGCGCTTGCCTTCGAGGCTTGCTGCTCCGATGCTTTGTCTCGGCTCGCAGCCGTGTGCTGAATCGTGCTGGTTGTTTCGGCTCAGTGTCGATTCTGTGGCGTTCTGGTCTAGTGCTGAGGCTTTTCTCGGCGGTGTTCGGATAGTTGCTTGGTGTTTCTGCGTTTTCCACGGCTCTGTCCGGTGCCTGTGGCTGAGTTTGTACGCTTCGCT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU34829 True 515 lncRNA 0.55 1 43703183 43703697

Neighbor


gene id symbol gene type direction distance location
LOC103027693 mcm3l,LOC108416133,LOC107712296,LOC108258154,LOC107697457 coding upstream 14377 43675001 ~ 43688806 (+)
LOC103026793 adcy1a,LOC108416099,LOC108257925,LOC107708029,LOC107697434,LOC107559745,LOC107581454,LOC107687179 coding upstream 244426 43428463 ~ 43458757 (+)
LOC103031694 myh6,LOC103031694,LOC102786665,LOC108251423,LOC780532 coding upstream 523964 43172940 ~ 43179219 (+)
LOC103030407 LOC108411385 coding upstream 531948 43136783 ~ 43171235 (+)
LOC103030938 NA coding upstream 567795 43115778 ~ 43135388 (+)
LOC103035929 palld,LOC107665352 coding downstream 18065 43721762 ~ 43883044 (+)
trmt1l trmt1l,LOC107698377 coding downstream 196105 43899802 ~ 43909913 (+)
LOC103028025 NA coding downstream 208136 43911833 ~ 43943410 (+)
mettl11b mettl11b,LOC107696087,LOC107698334,LOC107726432,LOC107732414 coding downstream 282957 43986654 ~ 43998810 (+)
gorab gorab coding downstream 332127 44035824 ~ 44041444 (+)
G25925 NA non-coding upstream 29464 43666621 ~ 43673719 (+)
G25914 NA non-coding upstream 59157 43596038 ~ 43644026 (+)
G25893 NA non-coding upstream 186089 43516798 ~ 43517094 (+)
G25888 NA non-coding upstream 218784 43484095 ~ 43484399 (+)
LOC111191905 NA non-coding upstream 237255 43463600 ~ 43465928 (+)
G25956 NA non-coding downstream 217842 43921539 ~ 43924269 (+)
G26039 NA non-coding downstream 404244 44107941 ~ 44202534 (+)
G26043 si:ch211-63o20.7,LOC108439852,LOC108258100,LOC107732427,LOC107698369,LOC107726431,LOC107599081 non-coding downstream 552776 44256473 ~ 44263202 (+)
G26088 NA non-coding downstream 568597 44272294 ~ 44272504 (+)
G26107 LOC108439850 non-coding downstream 616289 44319986 ~ 44323822 (+)
LOC103033920 LOC108416105 other upstream 208867 43490323 ~ 43494316 (+)
G25880 NA other upstream 278277 43424392 ~ 43424906 (+)
G25879 NA other upstream 281137 43421771 ~ 43422046 (+)
rps29 NA other upstream 339739 43360469 ~ 43363444 (+)
LOC103026014 LOC103026014,LOC108411425 other upstream 441084 43259620 ~ 43262099 (+)
fau fau,LOC108411505,LOC107704371 other downstream 2824671 46528368 ~ 46549553 (+)
G26915 NA other downstream 4574570 48278267 ~ 48315894 (+)
G26995 NA other downstream 4852100 48555797 ~ 48641905 (+)
LOC103035773 NA other downstream 4875106 48578803 ~ 48618075 (+)
G27075 NA other downstream 5037517 48741214 ~ 48742439 (+)

Expression



Co-expression Network