G26038


Basic Information

Item Value
gene id G26038
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 44054940 ~ 44056299 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU34996
ACAATATAGTTGCTCTGTTGCCAGCAACAGATATCAGCAATGGTCAGCAATCAAAGGACGCGCCAGAGCAGATAAGTCTCGACAAATGAAGCTTAACTTcgatgtgtatttttttttacatatcagatgatgaattgtttttttaatgttcacaTGACTGCATTAAAGTTACTGCTTGAAATGAAATCATTTTTATTCCCATAAGCTTTGCAAATATAAAATGTCATACAGATTCAAACAGGAACTATAAGTCGTTGTTCTTCAAAAAAAGAATTACATTTGTGTTAGTATGTGGAGCAGTTAGTTAATTCACCATGGGCCAACAGTTACTACTCAGTGGTATAGtatcaagaaaataaaaattgtgtaaaaagtcCCTTGTTTGCATTGAATGCAAGATCTGCGGTCCATTTTTAGATGCTTTTGACCAGTTCAAGTCCATGGGTTGTAGAATTCCAAATGAGCTAACAGTCCCATCacttttttattcagttcttgTGTAATTTCAAGCTTACAGCACACTACAGTCTCCCACAGGCTTCTCTGAGGAGCACACTTTATCCAGTTGAATCGAAATGAAAAAGGCCGCAAAAAGAAGAACAACAAAGAAAGAAGAAGTTACATCATCCAGACACTTTGACTGCCTCGCAGTCTCCATATCAGAGTCCAGATATATGAACAAAAAAGTAGCTACATTCATCAGCAATGATGAAGACGGTAACAAAAAAGCCAGAGCAGCAGGGGAATGAACCATAATTCCAGGGAAGGAGAGGAGGGCTGTTCTATTCCCAGCGGAGATTGGCTCTGTAAAAGGGCAAAAGAAGGATCTCTGCTTCAGACCAATTCATCCAGCTCCTCTGAGGCCTTTCAAGTCATCCAGCTCATTTGAGGCCTTAGCGATTCTCTGTTCCTCCACTCCTCCCTCCttcgctctcactctctctctctctctcactccccttTCAACGTTCTGTCTATGCTCAGTTAACTGTGGGCACCTGGTTGAGGCTGTACTCTTTGGCTTTCAGTCTTAGGTTTGCGATGCTGTTTGCCATGTTCATTCCCTGGGTGGAagtggtgttggcacaagtgggtGGGTAGTTTGCCATTGTttctgtgggcagcatttTCTGTGGCACTCGCACTGGCCCTCCCTCCGACCTTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU34996 True 1166 lncRNA 0.47 2 44054940 44056299

Neighbor

gene id symbol gene type direction distance location
kifap3 kifap3,LOC107726482,LOC107732413 coding downstream 73576 43946979 ~ 43981364 (-)
LOC103035417 NA coding downstream 338742 43709728 ~ 43716198 (-)
LOC103035096 NA coding downstream 350971 43688898 ~ 43703969 (-)
LOC103034775 NA coding downstream 381950 43666847 ~ 43672990 (-)
LOC103027377 LOC108416125,LOC101075333,LOC106560396 coding downstream 390138 43599657 ~ 43664802 (-)
slc25a24 slc25a24,LOC108439838,LOC107553450,LOC107732372,LOC107698372,LOC107696157,LOC107726490 coding upstream 145820 44202119 ~ 44219005 (-)
LOC103039281 si:ch211-63o20.7,LOC108439852,LOC108258100,LOC107732427,LOC107726431,LOC107698369 coding upstream 200152 44256451 ~ 44263193 (-)
LOC103040630 znf395 coding upstream 242648 44298947 ~ 44308698 (-)
LOC103028959 NA coding upstream 254955 44311254 ~ 44317837 (-)
LOC103041948 LOC108439850 coding upstream 265404 44321703 ~ 44324457 (-)
G26032 NA non-coding downstream 17103 44037302 ~ 44037837 (-)
G26031 NA non-coding downstream 19183 44035527 ~ 44035757 (-)
G26025 NA non-coding downstream 39592 44015140 ~ 44015348 (-)
G26024 NA non-coding downstream 53532 44000988 ~ 44001408 (-)
G26009 NA non-coding downstream 130588 43921876 ~ 43924352 (-)
G26083 NA non-coding upstream 138950 44195249 ~ 44198478 (-)
G26084 elp3,LOC107732362,LOC107698368,LOC107553498,LOC107696156,LOC107599080 non-coding upstream 164714 44221013 ~ 44224273 (-)
G26154 NA non-coding upstream 321024 44377323 ~ 44377527 (-)
G26158 cdc42bpb,LOC106607646 non-coding upstream 385362 44441661 ~ 44444962 (-)
LOC111197214 NA non-coding upstream 557911 44614210 ~ 44615581 (-)
cbr4 cbr4,LOC107597475,LOC107665353 other downstream 155180 43890629 ~ 43899760 (-)
G25967 mcm3l,LOC108416133,LOC108258154,LOC107697457 other downstream 376078 43675025 ~ 43678862 (-)
LOC103027084 LOC108416115,LOC103358919 other downstream 537783 43495419 ~ 43517157 (-)
G25785 NA other downstream 943539 43098822 ~ 43111401 (-)
G25678 NA other downstream 1336551 42717666 ~ 42718389 (-)
fkbp1b fkbp1b other upstream 712965 44769264 ~ 44799505 (-)
ubxn2a ubxn2a,LOC107603085,LOC107750080,LOC107697178 other upstream 799800 44856099 ~ 44870690 (-)
G26295 atad2b,LOC107697175,LOC107603081 other upstream 826479 44882778 ~ 44885801 (-)
G26388 NA other upstream 1379810 45436109 ~ 45437585 (-)
G26588 NA other upstream 1878854 45935153 ~ 45935622 (-)

Expression


Co-expression Network