G26202


Basic Information

Item Value
gene id G26202
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 44683188 ~ 44688403 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU35252
TGTCACGCCTgatcctgtttcctgtctgtcctcgtgcctgtattgtcccacgtgacccgtgcccctgtgttctgcctgtgattttccattacctcatgtctcatttgtagctccaccccttccccaggtgtttccactcccagtgtgtttcctgtctaGTTATATAGCTTTCCTCTGTCACCTGTCcgtgtcggtctttgcactgtctcc

Function

GO: NA

KEGG:

id description
ko04740 Olfactory transduction

RNA

RNA id representative length rna type GC content exon number start site end site
TU35252 True 210 lncRNA 0.52 2 44683188 44688403

Neighbor

gene id symbol gene type direction distance location
LOC103046392 LOC103046392,LOC108414880 coding upstream 203284 44474148 ~ 44479904 (+)
vipas39 vipas39,LOC107723381,LOC107746035,LOC107701516 coding upstream 211257 44460685 ~ 44471931 (+)
cdc42bpb cdc42bpb,LOC107684799,LOC106571112,LOC107746049 coding upstream 222929 44417438 ~ 44460259 (+)
LOC103042260 NA coding upstream 323785 44357276 ~ 44359403 (+)
LOC103041645 mcm3,LOC107732373,LOC107698330 coding upstream 335532 44339246 ~ 44347656 (+)
LOC111197225 LOC108410507 coding downstream 21970 44710373 ~ 44727205 (+)
wdcp wdcp,LOC107600078 coding downstream 115156 44803559 ~ 44808849 (+)
atad2b atad2b,LOC107697175,LOC107667607 coding downstream 184061 44872464 ~ 44960236 (+)
LOC103023922 NA coding downstream 745516 45433919 ~ 45441256 (+)
LOC103022161 NA coding downstream 807278 45495681 ~ 45501646 (+)
G26124 NA non-coding upstream 305661 44377325 ~ 44377527 (+)
G26121 NA non-coding upstream 315257 44364592 ~ 44367931 (+)
G26107 LOC108439850 non-coding upstream 359366 44319986 ~ 44323822 (+)
G26088 NA non-coding upstream 410684 44272294 ~ 44272504 (+)
G26043 si:ch211-63o20.7,LOC108439852,LOC108258100,LOC107732427,LOC107698369,LOC107726431,LOC107599081 non-coding upstream 419986 44256473 ~ 44263202 (+)
G26216 NA non-coding downstream 47431 44735834 ~ 44736653 (+)
G26217 NA non-coding downstream 48764 44737167 ~ 44738115 (+)
G26225 NA non-coding downstream 79754 44768157 ~ 44768487 (+)
G26226 NA non-coding downstream 80859 44769262 ~ 44770002 (+)
G26235 NA non-coding downstream 111581 44799984 ~ 44800646 (+)
LOC103033920 LOC108416105 other upstream 1188872 43490323 ~ 43494316 (+)
G25880 NA other upstream 1258282 43424392 ~ 43424906 (+)
G25879 NA other upstream 1261142 43421771 ~ 43422046 (+)
rps29 NA other upstream 1319744 43360469 ~ 43363444 (+)
LOC103026014 LOC103026014,LOC108411425 other upstream 1421089 43259620 ~ 43262099 (+)
fau fau,LOC108411505,LOC107704371 other downstream 1839965 46528368 ~ 46549553 (+)
G26915 NA other downstream 3589864 48278267 ~ 48315894 (+)
G26995 NA other downstream 3867394 48555797 ~ 48641905 (+)
LOC103035773 NA other downstream 3890400 48578803 ~ 48618075 (+)
G27075 NA other downstream 4052811 48741214 ~ 48742439 (+)

Expression


Co-expression Network