G26278


Basic Information

Item Value
gene id G26278
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 44853068 ~ 44853571 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU35340
TTTCCACACTCATCACTGTGACCTTTATAAACTGGTCGGCTGGCCCTCCCTTCATACTCGGCGGCTCCATCACTggtttaatttaatctataaagcAATATTGGGAAAGACACCACATTATCTCTCCTCTCTACTTGACATAGCCCGTAATACGTATCATACTAGGTCAAGTAATTGCATTAAGCTCACCATTCCAAAAACCCGTACTATTTTTGGTCGTAACTCCTTTCGTTTTGCAGCAGCAAATGACTGGAACGCCTTACAATGCACATTGAAATTTGAAATTTTAACTAAATTTACCACTTTCAAGCAAAAAATTGAGCATATCATAGTTGATGACTGTTCCTGTTAGTCTTTACAAGTCCTTGTTCTTTGTGTCTTTTATTGTtgacatgtttttagttttgtgttttatctATGTTTATGTGGTGCCTATTTCTATAGGGCCAGGTCATGTTTGTAAATGAGAACtggttctcaaacattttacctggtaaaataaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU35340 True 504 lncRNA 0.44 1 44853068 44853571

Neighbor

gene id symbol gene type direction distance location
LOC103027014 mfsd2b,si:dkeyp-115a10.3,LOC107750078,LOC107697177 coding downstream 1975 44808826 ~ 44851093 (-)
mut mut,LOC107726757,LOC107697172,LOC107726528 coding downstream 92863 44737167 ~ 44760205 (-)
LOC103028241 runx2b,runx2,LOC103028241,LOC108410521,LOC108258149,LOC107678859,LOC107726745 coding downstream 277793 44525886 ~ 44575275 (-)
LOC103042571 stmn4,LOC108439832,LOC108257558 coding downstream 485228 44360099 ~ 44367840 (-)
LOC103041948 LOC108439850 coding downstream 528611 44321703 ~ 44324457 (-)
klhl29 klhl29,LOC107667613,LOC107742703,LOC107697176 coding upstream 129673 44983244 ~ 45315255 (-)
trib2 trib2,LOC107742704,LOC107667617,LOC107717709,LOC107697179 coding upstream 505339 45358910 ~ 45365846 (-)
LOC103023605 napb,LOC106610947,LOC106599679,LOC103023605,LOC108411873,LOC108258064,LOC107756672,LOC107742707,LOC107593246,LOC107667620 coding upstream 587867 45441438 ~ 45448166 (-)
gpcpd1 gpcpd1,LOC107697181 coding upstream 597715 45451286 ~ 45465612 (-)
trmt6 trmt6,LOC107593280 coding upstream 648080 45501651 ~ 45512516 (-)
G26240 NA non-coding downstream 154153 44698411 ~ 44698915 (-)
G26238 NA non-coding downstream 164246 44683188 ~ 44688822 (-)
LOC111197214 NA non-coding downstream 237487 44614210 ~ 44615581 (-)
G26158 cdc42bpb,LOC106607646 non-coding downstream 408106 44441661 ~ 44444962 (-)
G26154 NA non-coding downstream 475541 44377323 ~ 44377527 (-)
G26290 NA non-coding upstream 8613 44862184 ~ 44865066 (-)
LOC111197337 NA non-coding upstream 258967 45112538 ~ 45113961 (-)
G26345 NA non-coding upstream 289319 45142890 ~ 45160930 (-)
G26347 NA non-coding upstream 386330 45239901 ~ 45240218 (-)
G26386 NA non-coding upstream 554862 45408433 ~ 45410036 (-)
fkbp1b fkbp1b other downstream 53563 44769264 ~ 44799505 (-)
cbr4 cbr4,LOC107597475,LOC107665353 other downstream 953308 43890629 ~ 43899760 (-)
G25967 mcm3l,LOC108416133,LOC108258154,LOC107697457 other downstream 1174206 43675025 ~ 43678862 (-)
LOC103027084 LOC108416115,LOC103358919 other downstream 1335911 43495419 ~ 43517157 (-)
G25785 NA other downstream 1741667 43098822 ~ 43111401 (-)
ubxn2a ubxn2a,LOC107603085,LOC107750080,LOC107697178 other upstream 2528 44856099 ~ 44870690 (-)
G26295 atad2b,LOC107697175,LOC107603081 other upstream 29207 44882778 ~ 44885801 (-)
G26388 NA other upstream 582538 45436109 ~ 45437585 (-)
G26588 NA other upstream 1081582 45935153 ~ 45935622 (-)
G26636 LOC108411685,LOC108258103,LOC101066055,LOC105902101 other upstream 1438516 46292087 ~ 46292806 (-)

Expression


Co-expression Network