G26322


Basic Information

Item Value
gene id G26322
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 45111185 ~ 45112968 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU35391
ttgtgccatgttctgtttttctttagttgtttacatgtgttctgtattttttttgtatgttttaggcAGCCTCCCTATATTCTGGCACATCATATCATGTTCATcttgtttgtataaataataaaagctgttgcaaataatgtggttcctattcataatccaaataattctgcataaaaTCTTCAAGTGGTGACAGAATATGGACAGATCTTTGTATTCTTTGACTTCGTTCTTTTCGTGGTGAACTCTCCATAGCTGCAAGCTGAaacttcttcatcttcttttcaACCTTAAATAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU35391 True 301 lncRNA 0.33 2 45111185 45112968

Neighbor

gene id symbol gene type direction distance location
atad2b atad2b,LOC107697175,LOC107667607 coding upstream 150949 44872464 ~ 44960236 (+)
wdcp wdcp,LOC107600078 coding upstream 302336 44803559 ~ 44808849 (+)
LOC111197225 LOC108410507 coding upstream 383980 44710373 ~ 44727205 (+)
LOC111191907 opn8a,LOC108410511,LOC107678826,LOC107726748,LOC107549662,LOC107743142 coding upstream 418013 44673130 ~ 44693172 (+)
LOC103046392 LOC103046392,LOC108414880 coding upstream 631281 44474148 ~ 44479904 (+)
LOC103023922 NA coding downstream 320951 45433919 ~ 45441256 (+)
LOC103022161 NA coding downstream 382713 45495681 ~ 45501646 (+)
LOC103028976 LOC103028976,LOC108410497,LOC107575557 coding downstream 447578 45560546 ~ 45570484 (+)
LOC103021983 plcb1,LOC108258091 coding downstream 502594 45615562 ~ 45785454 (+)
plcb4 plcb4,LOC108258041 coding downstream 689786 45802754 ~ 45926101 (+)
G26286 NA non-coding upstream 245501 44865143 ~ 44865684 (+)
G26280 NA non-coding upstream 256675 44853881 ~ 44854510 (+)
G26235 NA non-coding upstream 310539 44799984 ~ 44800646 (+)
G26226 NA non-coding upstream 341183 44769262 ~ 44770002 (+)
G26225 NA non-coding upstream 342698 44768157 ~ 44768487 (+)
G26390 NA non-coding downstream 337041 45450009 ~ 45538939 (+)
G26402 fermt1 non-coding downstream 411520 45524488 ~ 45528585 (+)
G26476 NA non-coding downstream 953920 46066888 ~ 46067187 (+)
G26477 NA non-coding downstream 967337 46080305 ~ 46083403 (+)
G26522 LOC103043020,LOC108411620,LOC108258012 non-coding downstream 1242917 46355885 ~ 46357866 (+)
LOC103033920 LOC108416105 other upstream 1616869 43490323 ~ 43494316 (+)
G25880 NA other upstream 1686279 43424392 ~ 43424906 (+)
G25879 NA other upstream 1689139 43421771 ~ 43422046 (+)
rps29 NA other upstream 1747741 43360469 ~ 43363444 (+)
LOC103026014 LOC103026014,LOC108411425 other upstream 1849086 43259620 ~ 43262099 (+)
fau fau,LOC108411505,LOC107704371 other downstream 1415400 46528368 ~ 46549553 (+)
G26915 NA other downstream 3165299 48278267 ~ 48315894 (+)
G26995 NA other downstream 3442829 48555797 ~ 48641905 (+)
LOC103035773 NA other downstream 3465835 48578803 ~ 48618075 (+)
G27075 NA other downstream 3628246 48741214 ~ 48742439 (+)

Expression


Co-expression Network