G26679


Basic Information

Item Value
gene id G26679
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 46480191 ~ 46480391 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU35860
AGGTATCTCCGCTCAAAGATGATTCTTAAAATGATTGAGTAAGCATCATGACCTTAACACCAAGATACAACAGTGATAAATTGGCATAGTTATGTagcattacatttaaaaataaattagagaCGGGATCTATGTTATAATTCTTTCCTTTTGGGTTACATGATCTTGAAGAATTTTCAGGTACTTTGTATTACTTTGTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU35860 True 201 lncRNA 0.40 1 46480191 46480391

Neighbor

gene id symbol gene type direction distance location
otx2 LOC108410484 coding upstream 19377 46456013 ~ 46460814 (+)
c3h14orf37 LOC107659812,LOC107574488,LOC107704373,LOC107713862 coding upstream 50142 46420148 ~ 46430049 (+)
entpd5 LOC103043327 coding upstream 127991 46341857 ~ 46352200 (+)
LOC103029419 LOC108411685,LOC108258103,LOC101066055 coding upstream 180067 46292008 ~ 46300124 (+)
LOC103028674 LOC108411639,LOC102297057 coding upstream 190911 46234679 ~ 46289280 (+)
prpf39 prpf39 coding downstream 38722 46519113 ~ 46525826 (+)
LOC103044458 LOC108424466 coding downstream 635061 47115452 ~ 47119014 (+)
tbc1d32 tbc1d32,LOC107602184,LOC107675228,LOC107727650 coding downstream 659158 47139549 ~ 47200208 (+)
man1a1 man1a1,LOC107727625 coding downstream 912856 47393247 ~ 47590416 (+)
LOC103032605 NA coding downstream 1437955 47918346 ~ 47926402 (+)
G26667 NA non-coding upstream 69316 46410431 ~ 46410875 (+)
G26529 NA non-coding upstream 70201 46363884 ~ 46409990 (+)
G26522 LOC103043020,LOC108411620,LOC108258012 non-coding upstream 122325 46355885 ~ 46357866 (+)
G26477 NA non-coding upstream 396788 46080305 ~ 46083403 (+)
G26476 NA non-coding upstream 413004 46066888 ~ 46067187 (+)
G26687 arf6,arf6a,arf6.2,ARF6,LOC105893149,LOC106608083 non-coding downstream 30894 46511285 ~ 46514839 (+)
G26705 fkbp3 non-coding downstream 53417 46533808 ~ 46535925 (+)
G26710 NA non-coding downstream 103632 46584023 ~ 46623216 (+)
G26717 NA non-coding downstream 181746 46662137 ~ 46663431 (+)
G26725 NA non-coding downstream 268099 46748490 ~ 46769667 (+)
LOC103033920 LOC108416105 other upstream 2985875 43490323 ~ 43494316 (+)
G25880 NA other upstream 3055285 43424392 ~ 43424906 (+)
G25879 NA other upstream 3058145 43421771 ~ 43422046 (+)
rps29 NA other upstream 3116747 43360469 ~ 43363444 (+)
LOC103026014 LOC103026014,LOC108411425 other upstream 3218092 43259620 ~ 43262099 (+)
fau fau,LOC108411505,LOC107704371 other downstream 47977 46528368 ~ 46549553 (+)
G26915 NA other downstream 1797876 48278267 ~ 48315894 (+)
G26995 NA other downstream 2075406 48555797 ~ 48641905 (+)
LOC103035773 NA other downstream 2098412 48578803 ~ 48618075 (+)
G27075 NA other downstream 2260823 48741214 ~ 48742439 (+)

Expression


Co-expression Network