G26717


Basic Information

Item Value
gene id G26717
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 46662137 ~ 46663431 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU35910
ataacaccaccacctgccagtgagctaccatgtgggagactggggttcaattccaggtctgggtgactatgctgtgctacaccaataagagtccttgggcaagactcctaacactacattggcccaactctgtaataggaataaaaataattgtaagtcgctctggataagagcgtcagctaaatgccctgtaatgtaatgtaatgtac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU35910 True 209 lncRNA 0.45 2 46662137 46663431

Neighbor

gene id symbol gene type direction distance location
prpf39 prpf39 coding upstream 136311 46519113 ~ 46525826 (+)
otx2 LOC108410484 coding upstream 201323 46456013 ~ 46460814 (+)
c3h14orf37 LOC107659812,LOC107574488,LOC107704373,LOC107713862 coding upstream 232088 46420148 ~ 46430049 (+)
entpd5 LOC103043327 coding upstream 309937 46341857 ~ 46352200 (+)
LOC103029419 LOC108411685,LOC108258103,LOC101066055 coding upstream 362013 46292008 ~ 46300124 (+)
LOC103044458 LOC108424466 coding downstream 452021 47115452 ~ 47119014 (+)
tbc1d32 tbc1d32,LOC107602184,LOC107675228,LOC107727650 coding downstream 476118 47139549 ~ 47200208 (+)
man1a1 man1a1,LOC107727625 coding downstream 729816 47393247 ~ 47590416 (+)
LOC103032605 NA coding downstream 1254915 47918346 ~ 47926402 (+)
fam184a fam184a,LOC107678849,LOC107697135,LOC106607780 coding downstream 1277006 47940437 ~ 48196539 (+)
G26710 NA non-coding upstream 38921 46584023 ~ 46623216 (+)
G26705 fkbp3 non-coding upstream 126212 46533808 ~ 46535925 (+)
G26687 arf6,arf6a,arf6.2,ARF6,LOC105893149,LOC106608083 non-coding upstream 147298 46511285 ~ 46514839 (+)
G26679 NA non-coding upstream 181746 46480191 ~ 46480391 (+)
G26667 NA non-coding upstream 251262 46410431 ~ 46410875 (+)
G26725 NA non-coding downstream 85059 46748490 ~ 46769667 (+)
G26762 NA non-coding downstream 348933 47012364 ~ 47012698 (+)
G26766 cx43,LOC107675226,LOC107602186,LOC107716890,LOC107598086 non-coding downstream 426106 47089537 ~ 47094913 (+)
G26770 NA non-coding downstream 441989 47105420 ~ 47106322 (+)
G26827 NA non-coding downstream 687197 47350628 ~ 47350899 (+)
fau fau,LOC108411505,LOC107704371 other upstream 112584 46528368 ~ 46549553 (+)
LOC103033920 LOC108416105 other upstream 3167821 43490323 ~ 43494316 (+)
G25880 NA other upstream 3237231 43424392 ~ 43424906 (+)
G25879 NA other upstream 3240091 43421771 ~ 43422046 (+)
rps29 NA other upstream 3298693 43360469 ~ 43363444 (+)
G26915 NA other downstream 1614836 48278267 ~ 48315894 (+)
G26995 NA other downstream 1892366 48555797 ~ 48641905 (+)
LOC103035773 NA other downstream 1915372 48578803 ~ 48618075 (+)
G27075 NA other downstream 2077783 48741214 ~ 48742439 (+)
G27238 LOC107747660 other downstream 2784414 49447845 ~ 49448221 (+)

Expression


Co-expression Network