G26725


Basic Information

Item Value
gene id G26725
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 46748490 ~ 46769667 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU35919
GTTTGAGTTGTtttgtatttcaatgaggaaaataagtatttgatccctcttgccaaacacactcaatacttagtggcaaagcctttgtttgcaagcacagcggtgagacgtttgttgtagttaaccacaagtttagcacacacaccagggggaattttggcccactcttctttgcagatcctctctaaatcatgaaggttggtgggctgtcgcttggcaactctgaccttcagctccctccatagattttcgatcggga

Function

GO:

id name namespace
GO:0017040 N-acylsphingosine amidohydrolase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU35919 True 259 lncRNA 0.44 2 46748490 46769667

Neighbor

gene id symbol gene type direction distance location
prpf39 prpf39 coding upstream 222664 46519113 ~ 46525826 (+)
otx2 LOC108410484 coding upstream 287676 46456013 ~ 46460814 (+)
c3h14orf37 LOC107659812,LOC107574488,LOC107704373,LOC107713862 coding upstream 318441 46420148 ~ 46430049 (+)
entpd5 LOC103043327 coding upstream 396290 46341857 ~ 46352200 (+)
LOC103029419 LOC108411685,LOC108258103,LOC101066055 coding upstream 448366 46292008 ~ 46300124 (+)
LOC103044458 LOC108424466 coding downstream 345785 47115452 ~ 47119014 (+)
tbc1d32 tbc1d32,LOC107602184,LOC107675228,LOC107727650 coding downstream 369882 47139549 ~ 47200208 (+)
man1a1 man1a1,LOC107727625 coding downstream 623580 47393247 ~ 47590416 (+)
LOC103032605 NA coding downstream 1148679 47918346 ~ 47926402 (+)
fam184a fam184a,LOC107678849,LOC107697135,LOC106607780 coding downstream 1170770 47940437 ~ 48196539 (+)
G26717 NA non-coding upstream 85059 46662137 ~ 46663431 (+)
G26710 NA non-coding upstream 125274 46584023 ~ 46623216 (+)
G26705 fkbp3 non-coding upstream 212565 46533808 ~ 46535925 (+)
G26687 arf6,arf6a,arf6.2,ARF6,LOC105893149,LOC106608083 non-coding upstream 233651 46511285 ~ 46514839 (+)
G26679 NA non-coding upstream 268099 46480191 ~ 46480391 (+)
G26762 NA non-coding downstream 242697 47012364 ~ 47012698 (+)
G26766 cx43,LOC107675226,LOC107602186,LOC107716890,LOC107598086 non-coding downstream 319870 47089537 ~ 47094913 (+)
G26770 NA non-coding downstream 335753 47105420 ~ 47106322 (+)
G26827 NA non-coding downstream 580961 47350628 ~ 47350899 (+)
G26857 NA non-coding downstream 897746 47667413 ~ 47670470 (+)
fau fau,LOC108411505,LOC107704371 other upstream 198937 46528368 ~ 46549553 (+)
LOC103033920 LOC108416105 other upstream 3254174 43490323 ~ 43494316 (+)
G25880 NA other upstream 3323584 43424392 ~ 43424906 (+)
G25879 NA other upstream 3326444 43421771 ~ 43422046 (+)
rps29 NA other upstream 3385046 43360469 ~ 43363444 (+)
G26915 NA other downstream 1508600 48278267 ~ 48315894 (+)
G26995 NA other downstream 1786130 48555797 ~ 48641905 (+)
LOC103035773 NA other downstream 1809136 48578803 ~ 48618075 (+)
G27075 NA other downstream 1971547 48741214 ~ 48742439 (+)
G27238 LOC107747660 other downstream 2678178 49447845 ~ 49448221 (+)

Expression


Co-expression Network