G26770


Basic Information

Item Value
gene id G26770
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 47105420 ~ 47106322 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU35973
TCCCAGACAAATATGAAGCCTAATAATTTTCTGAGAGCTGAATATTCCAGGACTAAACTCAATCCCTACCAGAAAAATGGCTGATAATAGATTAGATAGAAAAAAGTCATGCTAATATAGTGTCTGTATACATGTTATAGTAAATAGTCCCAATGTAATGGATGGTAACAGACATTGTGATAATAATACATTGATTATAATGCTGTGCTAACAGACTACATCATCAATTAATCTATACTCTCTAAACAAAGTCATTCATTCATAGCAACTGTTGCTACATTGGACAAGTTTAGCCAGTTTTGGCAAACTTAAAGTTTACCTCATATTTGCAGAGGCTCTCATTAGACTCCAGATATTACTAATTGGTAACTACATGCAAAGCAATGCAAATTGgcttttttacttatttctgagttttcaaaaaaaaaaaaggcaaatataTTTCTCCAGAAAAGTAACTATTCCTGTGAACTTCCTTTTCTCTGAGGAAATCATTTCTTTTTCTCATCCAGACACTTCTCTACTTCTTTTGGAGGTTCTGCAAATTATTGGCAATCTtggagaaaaaaagattttcaaaAGAAGTCTATAAATGAAGTCTGGAAAAATCATACAAATTAGAAACAAATTCATATtgcaaaatacagtatatcagtaTATGTTTGACTGGGGTTTTTGCTAATGTCCGTTTGTCTCAGTTGAGGATAGATGTATCTGTgagttgttttttaaataaaaggatTAAAACCCAGTtcttacacatacatacaaacaacgTCTAGACATGCATAATTTTAAAGACCTGAATCTGACCAGCAGTGTTCCCATGGATTTCCTTTTCTCTGGGGAAAGTCATTCCTTTCTACTTATCCagacacttttctttttttagagctTGTGCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU35973 True 903 lncRNA 0.33 1 47105420 47106322

Neighbor

gene id symbol gene type direction distance location
prpf39 prpf39 coding upstream 579594 46519113 ~ 46525826 (+)
otx2 LOC108410484 coding upstream 644606 46456013 ~ 46460814 (+)
c3h14orf37 LOC107659812,LOC107574488,LOC107704373,LOC107713862 coding upstream 675371 46420148 ~ 46430049 (+)
entpd5 LOC103043327 coding upstream 753220 46341857 ~ 46352200 (+)
LOC103029419 LOC108411685,LOC108258103,LOC101066055 coding upstream 805296 46292008 ~ 46300124 (+)
LOC103044458 LOC108424466 coding downstream 9130 47115452 ~ 47119014 (+)
tbc1d32 tbc1d32,LOC107602184,LOC107675228,LOC107727650 coding downstream 33227 47139549 ~ 47200208 (+)
man1a1 man1a1,LOC107727625 coding downstream 286925 47393247 ~ 47590416 (+)
LOC103032605 NA coding downstream 812024 47918346 ~ 47926402 (+)
fam184a fam184a,LOC107678849,LOC107697135,LOC106607780 coding downstream 834115 47940437 ~ 48196539 (+)
G26766 cx43,LOC107675226,LOC107602186,LOC107716890,LOC107598086 non-coding upstream 10507 47089537 ~ 47094913 (+)
G26762 NA non-coding upstream 92722 47012364 ~ 47012698 (+)
G26725 NA non-coding upstream 335753 46748490 ~ 46769667 (+)
G26717 NA non-coding upstream 441989 46662137 ~ 46663431 (+)
G26710 NA non-coding upstream 482204 46584023 ~ 46623216 (+)
G26827 NA non-coding downstream 244306 47350628 ~ 47350899 (+)
G26857 NA non-coding downstream 561091 47667413 ~ 47670470 (+)
G26860 NA non-coding downstream 565654 47671976 ~ 47672187 (+)
G26861 NA non-coding downstream 572680 47679002 ~ 47681080 (+)
G26862 NA non-coding downstream 574871 47681193 ~ 47681712 (+)
fau fau,LOC108411505,LOC107704371 other upstream 555867 46528368 ~ 46549553 (+)
LOC103033920 LOC108416105 other upstream 3611104 43490323 ~ 43494316 (+)
G25880 NA other upstream 3680514 43424392 ~ 43424906 (+)
G25879 NA other upstream 3683374 43421771 ~ 43422046 (+)
rps29 NA other upstream 3741976 43360469 ~ 43363444 (+)
G26915 NA other downstream 1171945 48278267 ~ 48315894 (+)
G26995 NA other downstream 1449475 48555797 ~ 48641905 (+)
LOC103035773 NA other downstream 1472481 48578803 ~ 48618075 (+)
G27075 NA other downstream 1634892 48741214 ~ 48742439 (+)
G27238 LOC107747660 other downstream 2341523 49447845 ~ 49448221 (+)

Expression


Co-expression Network