G26863


Basic Information

Item Value
gene id G26863
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 47681169 ~ 47681761 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU36089
gttaaattagaatatctttgaaaagttactttatttcagtaattcagttcaaaatgtgaatctcatatattatatagatgtattaaacacagagtgatctattttaagcgttcatttcttttattgttgatgattatgaagcttacagccaatgaaaacccaaaaatcagtgtctcagaaaatgagaatattatataagaccaactgataattttggcagcattttgctaagtcctgctggaaaatgaaatctgcatctccataaaagctctCAGCAGAGgtaagcatgaagtgctgtaagattttgctggaaaacaaaactgcactgactttggacttgataataaaacacagtggatcaacagcagcaggtcacatgtctctccaaaccatcactgattggtggaaactccACACTaccctcgagcagtttggactgtgtgtctctccactcttcctccagactctgctcccttgatttacaaatgaaatgtgaaatttactcATGATCAGTGATcagcaacaataaaagaaataaacacttaaaatagatcactctgtgtgtaatatatctatataatatatgagtttca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36089 True 593 lncRNA 0.34 1 47681169 47681761

Neighbor

gene id symbol gene type direction distance location
hsdl1 NA coding downstream 541851 47134735 ~ 47139318 (-)
LOC103033231 LOC103033231,LOC108424426,LOC108257936 coding downstream 546868 47129070 ~ 47134301 (-)
LOC103043748 LOC108424468 coding downstream 552387 47126477 ~ 47128782 (-)
LOC103044766 LOC103044766,LOC108424467,LOC108257939 coding downstream 556699 47122168 ~ 47124470 (-)
LOC103044065 LOC108424424 coding downstream 579538 47096096 ~ 47101631 (-)
slc35f1 slc35f1,LOC107697151,LOC107743307,LOC107727669,LOC107678858 coding upstream 644124 48325885 ~ 48446366 (-)
cdk19 cdk19 coding upstream 763616 48445377 ~ 48539382 (-)
ppil4 ppil4 coding upstream 880743 48562504 ~ 48576593 (-)
katna1 katna1,LOC107755263,LOC107683938,LOC107665349,LOC107737259,LOC107597454 coding upstream 1041239 48723000 ~ 48735370 (-)
mdn1 mdn1,LOC107755265,LOC107601919,LOC107737285,LOC107597457 coding upstream 1065139 48746900 ~ 48851645 (-)
G26859 NA non-coding downstream 10707 47667957 ~ 47670462 (-)
G26847 NA non-coding downstream 84698 47586130 ~ 47596471 (-)
G26846 man1a1,LOC107727625 non-coding downstream 111882 47435445 ~ 47569287 (-)
G26849 NA non-coding downstream 218231 47462293 ~ 47462938 (-)
LOC111188267 NA non-coding downstream 297101 47380842 ~ 47384068 (-)
G26868 NA non-coding upstream 15620 47697381 ~ 47697580 (-)
G26888 NA non-coding upstream 205990 47887751 ~ 47889346 (-)
G26944 NA non-coding upstream 530334 48212095 ~ 48215258 (-)
G26953 NA non-coding upstream 577621 48259382 ~ 48259692 (-)
LOC111188411 NA non-coding upstream 711360 48393121 ~ 48394416 (-)
G26754 NA other downstream 942433 46704347 ~ 46738736 (-)
fkbp3 fkbp3 other downstream 1145334 46533695 ~ 46535835 (-)
G26695 prpf39,LOC107729032 other downstream 1155173 46518871 ~ 46525996 (-)
naa30 naa30,LOC108270341 other downstream 1245244 46427417 ~ 46435925 (-)
G26636 LOC108411685,LOC108258103,LOC101066055,LOC105902101 other downstream 1388363 46292087 ~ 46292806 (-)
LOC103039734 LOC108424428 other upstream 535745 48217506 ~ 48324662 (-)
pln NA other upstream 596501 48278262 ~ 48288736 (-)
G27145 NA other upstream 1205233 48886994 ~ 48891028 (-)
G27258 NA other upstream 1956998 49638759 ~ 49639444 (-)
G27400 NA other upstream 2800128 50481889 ~ 50531639 (-)

Expression


Co-expression Network