G26868


Basic Information

Item Value
gene id G26868
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 47697381 ~ 47697580 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU36094
ggtgcagggaggacgcggaggcggacgcataTGCAAACAACAAGGGATTTATTTAacaacaggactgaggaaactcgGGAAACCATGGAgtactgacagacgataaacgtacaaggatcgacaccggggaaatggaacacggaccttaaatagaggtgcacacacacaggaaacaggaaacacctgggacgaaggggcgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36094 True 200 lncRNA 0.52 1 47697381 47697580

Neighbor

gene id symbol gene type direction distance location
hsdl1 NA coding downstream 558063 47134735 ~ 47139318 (-)
LOC103033231 LOC103033231,LOC108424426,LOC108257936 coding downstream 563080 47129070 ~ 47134301 (-)
LOC103043748 LOC108424468 coding downstream 568599 47126477 ~ 47128782 (-)
LOC103044766 LOC103044766,LOC108424467,LOC108257939 coding downstream 572911 47122168 ~ 47124470 (-)
LOC103044065 LOC108424424 coding downstream 595750 47096096 ~ 47101631 (-)
slc35f1 slc35f1,LOC107697151,LOC107743307,LOC107727669,LOC107678858 coding upstream 628305 48325885 ~ 48446366 (-)
cdk19 cdk19 coding upstream 747797 48445377 ~ 48539382 (-)
ppil4 ppil4 coding upstream 864924 48562504 ~ 48576593 (-)
katna1 katna1,LOC107755263,LOC107683938,LOC107665349,LOC107737259,LOC107597454 coding upstream 1025420 48723000 ~ 48735370 (-)
mdn1 mdn1,LOC107755265,LOC107601919,LOC107737285,LOC107597457 coding upstream 1049320 48746900 ~ 48851645 (-)
G26863 NA non-coding downstream 15620 47681169 ~ 47681761 (-)
G26859 NA non-coding downstream 26919 47667957 ~ 47670462 (-)
G26847 NA non-coding downstream 100910 47586130 ~ 47596471 (-)
G26846 man1a1,LOC107727625 non-coding downstream 128094 47435445 ~ 47569287 (-)
G26849 NA non-coding downstream 234443 47462293 ~ 47462938 (-)
G26888 NA non-coding upstream 190171 47887751 ~ 47889346 (-)
G26944 NA non-coding upstream 514515 48212095 ~ 48215258 (-)
G26953 NA non-coding upstream 561802 48259382 ~ 48259692 (-)
LOC111188411 NA non-coding upstream 695541 48393121 ~ 48394416 (-)
LOC111188398 herc2 non-coding upstream 738196 48435776 ~ 48438690 (-)
G26754 NA other downstream 958645 46704347 ~ 46738736 (-)
fkbp3 fkbp3 other downstream 1161546 46533695 ~ 46535835 (-)
G26695 prpf39,LOC107729032 other downstream 1171385 46518871 ~ 46525996 (-)
naa30 naa30,LOC108270341 other downstream 1261456 46427417 ~ 46435925 (-)
G26636 LOC108411685,LOC108258103,LOC101066055,LOC105902101 other downstream 1404575 46292087 ~ 46292806 (-)
LOC103039734 LOC108424428 other upstream 519926 48217506 ~ 48324662 (-)
pln NA other upstream 580682 48278262 ~ 48288736 (-)
G27145 NA other upstream 1189414 48886994 ~ 48891028 (-)
G27258 NA other upstream 1941179 49638759 ~ 49639444 (-)
G27400 NA other upstream 2784309 50481889 ~ 50531639 (-)

Expression


Co-expression Network