G26890



Basic Information


Item Value
gene id G26890
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 47908691 ~ 47931951 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence


>TU36117
aaaaaaaaaaaaaaaaaaataaataaaataaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaataaaaaa

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU36117 True 201 lncRNA 0.36 2 47908691 47931951

Neighbor


gene id symbol gene type direction distance location
man1a1 man1a1,LOC107727625 coding upstream 318275 47393247 ~ 47590416 (+)
tbc1d32 tbc1d32,LOC107602184,LOC107675228,LOC107727650 coding upstream 708483 47139549 ~ 47200208 (+)
LOC103044458 LOC108424466 coding upstream 789677 47115452 ~ 47119014 (+)
prpf39 prpf39 coding upstream 1382865 46519113 ~ 46525826 (+)
otx2 LOC108410484 coding upstream 1447877 46456013 ~ 46460814 (+)
fam184a fam184a,LOC107678849,LOC107697135,LOC106607780 coding downstream 8486 47940437 ~ 48196539 (+)
mcm9 mcm9,LOC107549683 coding downstream 268985 48200936 ~ 48219344 (+)
cep85l cep85l,LOC107727619,LOC107603087,LOC107678822 coding downstream 300319 48232270 ~ 48311540 (+)
amd1 amd1 coding downstream 609584 48541535 ~ 48565601 (+)
LOC111194359 LOC108441310,LOC108412179,LOC108441308 coding downstream 688779 48620730 ~ 48621912 (+)
G26872 NA non-coding upstream 155825 47752634 ~ 47752866 (+)
G26867 NA non-coding upstream 211111 47697342 ~ 47697580 (+)
G26864 NA non-coding upstream 226450 47681924 ~ 47682241 (+)
G26862 NA non-coding upstream 226979 47681193 ~ 47681712 (+)
G26861 NA non-coding upstream 227611 47679002 ~ 47681080 (+)
G26910 NA non-coding downstream 280186 48212137 ~ 48212982 (+)
G26982 NA non-coding downstream 486881 48418832 ~ 48450456 (+)
G26993 NA non-coding downstream 620282 48552233 ~ 48552667 (+)
G26994 NA non-coding downstream 620898 48552849 ~ 48553157 (+)
G26996 NA non-coding downstream 630653 48562604 ~ 48567294 (+)
fau fau,LOC108411505,LOC107704371 other upstream 1359138 46528368 ~ 46549553 (+)
LOC103033920 LOC108416105 other upstream 4414375 43490323 ~ 43494316 (+)
G25880 NA other upstream 4483785 43424392 ~ 43424906 (+)
G25879 NA other upstream 4486645 43421771 ~ 43422046 (+)
rps29 NA other upstream 4545247 43360469 ~ 43363444 (+)
G26915 NA other downstream 346316 48278267 ~ 48315894 (+)
G26995 NA other downstream 623846 48555797 ~ 48641905 (+)
LOC103035773 NA other downstream 646852 48578803 ~ 48618075 (+)
G27075 NA other downstream 809263 48741214 ~ 48742439 (+)
G27238 LOC107747660 other downstream 1515894 49447845 ~ 49448221 (+)

Expression



Co-expression Network