LOC103035773


Basic Information

Item Value
gene id LOC103035773
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 48578803 ~ 48618075 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU36292
CGGAACCAAAACTGATCTCAGAGTgcagctctctttctctctctctctctctctctctctctctctctcaggaaaaTGGCAGAGCCCAGCCTTTCAGTAGATCAGGATCAGTTCAACTGTCCAGTCTGTTTGGAGGTGCTGAAGGATACAGTGGCCATTACCTGTGGACATAGTTTCCGTATGAATCAACTAAAGGAAAACCAGATGAATTCCCAGCAGAGAATccaggagaaagagAAAACTGTGCAGGAACTGAAACAGGCGGTAAAATCTCTTAAGCTCTCTGCACAGtcagcagtggaggacagtgagaggaTCTTTACTGAGCTGATCCGCTCCATTGAGAAAAAGCGCTCTGAGGTAACAGAGCTGATCAGAGATCAGGAGAAGACTGAACTGAGTGCAGCTGAAGAACTTct
>XM_022678326.1
AGAAACCCGGAAGAGGTTCTGCAGTGGGTGTTCTCCTCTGTAGAGGCTCTGTGGTTTTCCTCCAGCAGATACGAGAGGATTCATAAAGCTTGACTGTTCTACTTCAGTGGTGTATGAGGCTGTCTGAAACAAACCCCCTCTCCTCCTCAGTTCCTCAAAGGAAAGGAATCTCGGATCTCAgagtgctgctctctctctttttctcttcctctcctgcTGTGAGAGCAGGAAAATGGCAAAGGTCAGTATTTTAGATCAGGATCGGTTCATTTGTTCAGTCTGTCTGGATCTACTGAAGGATCCAGTGACCATCAACTGTGGACACAGTTACTGTATGGTGTGTATTAATGGACACTGGGATCAGGAGGATCAGAGGGGGCTCTACAGCTGCCCCCAGTGCAGAGAGACGTTCACTCCGAGGCCTGTTCTACGCAGAAACAACATGCTGGCTGAAGTGGTGGAGAAACTGAAGAAGACAGAAGTCCGAGCTGCTTCTCCTGCTCACTGTTACGCTGGAGCTGGAGATGTGGAGTGTGATTTCTGTACTGGGAGAAAACTCAAAGCCATCAAGTCCTGTCTGATGTGTTTAGTTTCTCTTTGTGAAACTCATCTTAAACCTCACTATGATGTTGCTGCTTTGAAAAAACACAAGCTGGTTAAAGCGTCCACACGACTACAGGAGAAGATCTGCTCTCAGCATGATAAACTGATCGAGATCTACTGTCGCACTGATCAGAGGTGCATCTGCTATTTGTGCATGTTGGATGACCATAAAGGTCATGAGACTGTTCCAGCTGCAACAGGAagaacagagaaacagAGTCAGCTTATGGAGAAAAAGGGGTTATTCCAGCAGAAAATCCAGGATAAAGAGAAGGCGCTTCAGGAGCTGAAACAGGCGGTAAAATCTCTTAAGgTCTCTGCACAGtcagcagtggaggacagtgagaggaTCTTTACTGAGCTGATCCGCTCCATTGAGAAAAAGCGCTCTGAGGTAACAGAGCTGATCAGAGATCAGGAGAAGACTGAACTGAGTGCAGCTGAAGAACTTctggagcagctggagcagGAGATCACTGATCTAAAGAGGAGAAacactgagctggagcagctttcACACACAGAGGATCACATCCACTTCCTCCAGAGTTTCCAGACTCTCAGtgtctctgctgaatctgatcAGTCACCCAACATCAGTGTCCATCAGCATCTCTCATTTGATGAAGTGATCAGATCTGTATCTGATCTGAAACAGCAACTAGAGAAACTGTGTGAAGAGAAGATCAGCAGAATGTCTCCACATGCTGCAGCAGTTCAGATTTTACTACCAGAACCAAAAACCAGAGAAGACTTTCTGCAATATTTCTCTCGGCTGACTCTGGATCCCAACACAGTAAATTGTCAACTCAGtctgtctgagaaaaacagagtGGTGATATGCAGCCAGAATGTCCAGAAGTATCATTATCATCCGGAGAGATTTGATTACTGGTGTCAGGTGTTGAGTAAGGAGAGTGTGAGtggacgctgttactgggaggtTGAGTGGAGCAGTGAGGGTGGATCTGTGCACATATCAGTGGCGTATAAAGATATAAGCAGGAAAGAATGGCATAATGATTCTGGGTTTGGACACAATAATCACTCCTGGAGTCTGCAGACtacttctcctctctctttctggcaCAACAACACTGAGACTAAGCTCTCAGCTCCTCCATCCTCCAGaataggagtgtatgtggatcACAGTGCAGgaactctgtccttctacagcgTCTCTGATACAATGACCCTCctacacacagtccacaccacaTTCACTCAGCCCCTCTACGCTGGATTCTACTTATTATTTCCTTATTATAATTCCACTGTAACATTGActctctttctctctctctctctctctctctctctctctctcaggaaaaTGGCAGAGCCCAGCCTTTCAGTAGATCAGGATCAGTTCAACTGTCCAGTCTGTTTGGAGGTGCTGAAGGATACAGTGGCCATTACCTGTGGACATAGTTTCCGTATGAATCAACTAAAGGAAAACCAGATGAATTCCCAGCAGAGAATccaggagaaagagaagaagctGCAGGAACTGAAACAGGCGGTAAAAACTCTTAAGAGCTCTGCACAGtcagcagtggaggacagtgagaggaTCTTTACTGAGCTGATCCGCTCCATTGAGAAAAAGCGCTCTGAGGTAACAGAGCTGATCAGAGATCAGGAGAAGACTGAACTGAGTGCAGCTGAAGAACTCctggagcagctggagcagGAGATCACTGATCTAAAGAGGAGAAacactgagctggagcagctttcACACACAGAGGATCACATCCACTTCCTCCAGAGTTTCGAGTCTCTCAGTGTCTCTTCTGGATCTGATCAGTCACCCAACATCAGTGTCCGTCAGCATCTCTCATTTGATGCAGTGATCAGATCTGTATCTGATCTGAAACAGCAACTAGAGGAACTGTGTGAAGAGAAGATCAGCAGATTGTCTCCTAATGCTGAAGCAGTGGAGAACTTACCTTCAGAaccaaaaatgagaaaagactTTCTACAGTCTGCAGCAATTCAGATTTTACTACCAAAACCAAAAACTAGAGAAGACTTTCTGCAATATTTCTGTCGGCTGACTTTGGATCCCAACACAGTAAATCCTCAGCTCATTCTGTCTGAGGAGAACAGAGTGGTGACAGGCAGTCAGAAGGTCCAGCAGtatcctgatcatccagagagatttgatTGGTGGTTTCAGGTGCTGAGTAAGGAGAGTGTGAGtggacgctgttactgggaAGTTGAGTGGACTAGTGTGGAGTATGTGTACATATCAGTGGCGTATAAAGAAATCAGCAGAAAAGGAGGGCGTGAATCTAAATTTGGAGGAAACGGTCAGTCCTGGAGTCTACTgacttcttctcctctctctttctggcaCAACGACACTGAAACTGTGCTCTCAGCTCCTCCATCCTCCAGaataggagtgtatgtggatcACAGTGCAGgaactctgtccttctacagcgTCTCTGATACAATGACCCTCctacacacagtccacaccacaTTCACTCAGCCCCTCTTTGCTGGATTCTGGCTTCCTTTTGTGGAATCAACTGTAAGATTATGCAATCCAATATAAACATGTCTGATACAGTTTATTCAGTGAAGGAGATGGTGGGATCGACACTCCTAATTTCTCAGTGGTCACACTGTATTCTCTTAAACACATCTCACATTTTGTTGAATTATTTATGACTTCAGTAAATACAACTTCAAATTAGAATAGTTTGGGACAGTGTGGTAAAAGCTATGCTTGTGTtggattgcagacagtataaactcaatatatttcatgttttgtcaggTAAACTCAACATTAGCTATTCAGGCCTAAAACACATTCCAACAAAAGTTGTGATggtaaagcatttacattttttaatgttgcCAATCCTCCTTACTTAAAAGATATTTTGGTTCTGAGGATACCAAATGATGCAGTGCTTTAGGTGTTCAAAATTCTTCCCAAATTCTTTACTGGGGGCAGGTCAGAACTGCAGACATGCCAGTTCAGTAGCCACACCCTTTTTTCTGTTGCCATGCCCTTGTACTGTGTGCAGCATGTAATTTGCATgcaaaaatgcatgaaaatccCTGGAAAAGGAGGCATATGTTGCTCTTAGATCCCTGTACTGagattaatgctgcatcacagaagtgtgCTGACACAAACCCCATACCATTACAGACCCTGGACTtattgctgataacagtctgaacTTGTCCTTTTCATCTTTATTCCAAAGCTTGTGGTTTACATTTCTTCTAAAAAAGACCTGAAATACAGATTTGTCTGATCACAGTA

Function

GO:

id name namespace
GO:1901136 carbohydrate derivative catabolic process biological_process

KEGG:

id description
ko00480 Glutathione metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
TU36292 False 419 TUCP 0.47 4 48590949 48604905
XM_022678326.1 True 3904 mRNA 0.45 14 48578803 48618075

Neighbor

gene id symbol gene type direction distance location
amd1 amd1 coding upstream 13202 48541535 ~ 48565601 (+)
cep85l cep85l,LOC107727619,LOC107603087,LOC107678822 coding upstream 267263 48232270 ~ 48311540 (+)
mcm9 mcm9,LOC107549683 coding upstream 359459 48200936 ~ 48219344 (+)
fam184a fam184a,LOC107678849,LOC107697135,LOC106607780 coding upstream 382264 47940437 ~ 48196539 (+)
LOC103032605 NA coding upstream 652401 47918346 ~ 47926402 (+)
LOC111194359 LOC108441310,LOC108412179,LOC108441308 coding downstream 2655 48620730 ~ 48621912 (+)
LOC103035465 NA coding downstream 31613 48649688 ~ 48654677 (+)
LOC103035149 NA coding downstream 54012 48672087 ~ 48679878 (+)
LOC103034613 NA coding downstream 72049 48690124 ~ 48694492 (+)
LOC103042815 NA coding downstream 81538 48699613 ~ 48707949 (+)
G26996 NA non-coding upstream 11509 48562604 ~ 48567294 (+)
G26994 NA non-coding upstream 25646 48552849 ~ 48553157 (+)
G26993 NA non-coding upstream 26136 48552233 ~ 48552667 (+)
G26982 NA non-coding upstream 128347 48418832 ~ 48450456 (+)
G26910 NA non-coding upstream 365821 48212137 ~ 48212982 (+)
G27008 NA non-coding downstream 16369 48634444 ~ 48634842 (+)
LOC111188407 NA non-coding downstream 46580 48664655 ~ 48668564 (+)
G27072 katna1,LOC107755263,LOC107683938,LOC107665349,LOC107737259,LOC107597454 non-coding downstream 105256 48723331 ~ 48735530 (+)
G27099 NA non-coding downstream 147414 48765489 ~ 48765945 (+)
G27130 NA non-coding downstream 236437 48854512 ~ 48874216 (+)
G26915 NA other upstream 262909 48278267 ~ 48315894 (+)
fau fau,LOC108411505,LOC107704371 other upstream 2029250 46528368 ~ 46549553 (+)
LOC103033920 LOC108416105 other upstream 5084487 43490323 ~ 43494316 (+)
G25880 NA other upstream 5153897 43424392 ~ 43424906 (+)
G25879 NA other upstream 5156757 43421771 ~ 43422046 (+)
G27075 NA other downstream 123139 48741214 ~ 48742439 (+)
G27238 LOC107747660 other downstream 829770 49447845 ~ 49448221 (+)
moxd1 moxd1,LOC107737327 other downstream 1721489 50339564 ~ 50408570 (+)
nup43 nup43 other downstream 2126808 50744883 ~ 50753961 (+)
lyrm2 lyrm2 other downstream 2151788 50769863 ~ 50772162 (+)

Expression


Co-expression Network