Gene
RNA
| Item | Value |
|---|---|
| gene id | G27030 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035899.1 |
| NCBI id | CM008302.1 |
| chromosome length | 74127438 |
| location | 48552832 ~ 48553160 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU36329 | True | 329 | lncRNA | 0.34 | 1 | 48552832 | 48553160 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cdk19 | cdk19 | coding | downstream | 13450 | 48445377 ~ 48539382 (-) |
| slc35f1 | slc35f1,LOC107697151,LOC107743307,LOC107727669,LOC107678858 | coding | downstream | 106466 | 48325885 ~ 48446366 (-) |
| hsdl1 | NA | coding | downstream | 1413514 | 47134735 ~ 47139318 (-) |
| LOC103033231 | LOC103033231,LOC108424426,LOC108257936 | coding | downstream | 1418531 | 47129070 ~ 47134301 (-) |
| LOC103043748 | LOC108424468 | coding | downstream | 1424050 | 47126477 ~ 47128782 (-) |
| ppil4 | ppil4 | coding | upstream | 9344 | 48562504 ~ 48576593 (-) |
| katna1 | katna1,LOC107755263,LOC107683938,LOC107665349,LOC107737259,LOC107597454 | coding | upstream | 169840 | 48723000 ~ 48735370 (-) |
| mdn1 | mdn1,LOC107755265,LOC107601919,LOC107737285,LOC107597457 | coding | upstream | 193740 | 48746900 ~ 48851645 (-) |
| bach2 | bach2 | coding | upstream | 356392 | 48909552 ~ 49075894 (-) |
| map3k7 | map3k7 | coding | upstream | 566802 | 49119962 ~ 49147483 (-) |
| G27029 | NA | non-coding | downstream | 270 | 48552236 ~ 48552562 (-) |
| LOC111188398 | herc2 | non-coding | downstream | 114142 | 48435776 ~ 48438690 (-) |
| LOC111188411 | NA | non-coding | downstream | 158416 | 48393121 ~ 48394416 (-) |
| G26953 | NA | non-coding | downstream | 293140 | 48259382 ~ 48259692 (-) |
| G26944 | NA | non-coding | downstream | 337574 | 48212095 ~ 48215258 (-) |
| G27035 | LOC108427529 | non-coding | upstream | 32887 | 48586047 ~ 48694424 (-) |
| G27046 | NA | non-coding | upstream | 81288 | 48634448 ~ 48634837 (-) |
| G27062 | NA | non-coding | upstream | 122593 | 48675753 ~ 48676840 (-) |
| G27081 | NA | non-coding | upstream | 191901 | 48745061 ~ 48745344 (-) |
| G27136 | NA | non-coding | upstream | 301505 | 48854665 ~ 48872464 (-) |
| LOC103039734 | LOC108424428 | other | downstream | 228170 | 48217506 ~ 48324662 (-) |
| pln | NA | other | downstream | 264096 | 48278262 ~ 48288736 (-) |
| G26754 | NA | other | downstream | 1814096 | 46704347 ~ 46738736 (-) |
| fkbp3 | fkbp3 | other | downstream | 2016997 | 46533695 ~ 46535835 (-) |
| G26695 | prpf39,LOC107729032 | other | downstream | 2026836 | 46518871 ~ 46525996 (-) |
| G27145 | NA | other | upstream | 333834 | 48886994 ~ 48891028 (-) |
| G27258 | NA | other | upstream | 1085599 | 49638759 ~ 49639444 (-) |
| G27400 | NA | other | upstream | 1928729 | 50481889 ~ 50531639 (-) |
| LOC103034285 | NA | other | upstream | 1969739 | 50522899 ~ 50539672 (-) |
| pcmt1 | pcmt1 | other | upstream | 2171903 | 50725063 ~ 50740434 (-) |
