G27075


Basic Information

Item Value
gene id G27075
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 48741214 ~ 48742439 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU36385
GCAACAGTTCGGTTTAGAAGAAGCTCACTTTGGACTGAGAAGTTCAAGGCTGAACACGAGCGATTTTGATCTGCGGATTATCCTCTACTCCTCAACTCACTTCACACTCATTCTCACTCTTTTCTCAATATTTCTCACAAATTTCTTATTACTTTCTCTCGTTTCTGTCAGTGCTTCTCACTATGCCTTTTCCAGTCTATTTTTCAGATGGTGCTGCGGAGCTGCTGGACTTCCTGGACTGGCTGGATCATCTCTTCTCCCGTTTCCCCAGACCCAACCTTCGTGCTCTTCTTCAGGTACTACCCGGATTTCCTCCAGTGCAGACCTTGGTGTTCCTCTGTCCGTCCTTTCCTCTCCTTAGGCCGGATGGATTTGCTCAGTTACTGAACCTCCCAGATGTCGGTCTGTTCTACCACTTTCTTCCCCCTGGTGTGGGAGGACAGAGCCGAGTACTGGGAGTGGCGTCTCAGCAGCCATGTTGCCCACCTGTGCTACATGGATCTGCTGTGGAGAGACTACCTGAAGACCAGGGATCCCCCAACTGCCTGCAGACAGCTGGAGCCTCGACCAGACAGGGACCACAAGCCGGGG

Function

NR:

description
PREDICTED: cytochrome b-c1 complex subunit Rieske, mitochondrial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36385 True 591 TUCP 0.42 3 48741214 48742439

Neighbor

gene id symbol gene type direction distance location
ginm1 ginm1 coding upstream 18304 48711573 ~ 48722910 (+)
LOC103042815 NA coding upstream 33265 48699613 ~ 48707949 (+)
LOC103034613 NA coding upstream 46722 48690124 ~ 48694492 (+)
LOC103035149 NA coding upstream 61336 48672087 ~ 48679878 (+)
LOC103035465 NA coding upstream 86537 48649688 ~ 48654677 (+)
casp8ap2 NA coding downstream 141563 48884002 ~ 48895979 (+)
gja10 gja10 coding downstream 154777 48897216 ~ 48900234 (+)
LOC111191919 NA coding downstream 578982 49321421 ~ 49333922 (+)
ctgf ctgf,ctgfa,LOC107683930,LOC107737382,LOC107737295,LOC107593869,LOC107556147 coding downstream 1770514 50512953 ~ 50515944 (+)
lrp11 lrp11 coding downstream 1963810 50706249 ~ 50723932 (+)
G27072 katna1,LOC107755263,LOC107683938,LOC107665349,LOC107737259,LOC107597454 non-coding upstream 5684 48723331 ~ 48735530 (+)
LOC111188407 NA non-coding upstream 72650 48664655 ~ 48668564 (+)
G27008 NA non-coding upstream 106372 48634444 ~ 48634842 (+)
G26996 NA non-coding upstream 173920 48562604 ~ 48567294 (+)
G26994 NA non-coding upstream 188057 48552849 ~ 48553157 (+)
G27099 NA non-coding downstream 23050 48765489 ~ 48765945 (+)
G27130 NA non-coding downstream 112073 48854512 ~ 48874216 (+)
G27150 NA non-coding downstream 162217 48904656 ~ 48906548 (+)
G27164 NA non-coding downstream 376189 49118628 ~ 49121736 (+)
G27224 NA non-coding downstream 525930 49268369 ~ 49268626 (+)
G26995 NA other upstream 99309 48555797 ~ 48641905 (+)
LOC103035773 NA other upstream 123139 48578803 ~ 48618075 (+)
G26915 NA other upstream 425320 48278267 ~ 48315894 (+)
fau fau,LOC108411505,LOC107704371 other upstream 2191661 46528368 ~ 46549553 (+)
LOC103033920 LOC108416105 other upstream 5246898 43490323 ~ 43494316 (+)
G27238 LOC107747660 other downstream 705406 49447845 ~ 49448221 (+)
moxd1 moxd1,LOC107737327 other downstream 1597125 50339564 ~ 50408570 (+)
nup43 nup43 other downstream 2002444 50744883 ~ 50753961 (+)
lyrm2 lyrm2 other downstream 2027424 50769863 ~ 50772162 (+)
G27489 NA other downstream 2432049 51174488 ~ 51178374 (+)

Expression


Co-expression Network