Gene
RNA
| Item | Value |
|---|---|
| gene id | G27081 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035899.1 |
| NCBI id | CM008302.1 |
| chromosome length | 74127438 |
| location | 48745061 ~ 48745344 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU36393 | True | 284 | lncRNA | 0.35 | 1 | 48745061 | 48745344 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| katna1 | katna1,LOC107755263,LOC107683938,LOC107665349,LOC107737259,LOC107597454 | coding | downstream | 9691 | 48723000 ~ 48735370 (-) |
| ppil4 | ppil4 | coding | downstream | 168468 | 48562504 ~ 48576593 (-) |
| cdk19 | cdk19 | coding | downstream | 205679 | 48445377 ~ 48539382 (-) |
| slc35f1 | slc35f1,LOC107697151,LOC107743307,LOC107727669,LOC107678858 | coding | downstream | 298695 | 48325885 ~ 48446366 (-) |
| hsdl1 | NA | coding | downstream | 1605743 | 47134735 ~ 47139318 (-) |
| mdn1 | mdn1,LOC107755265,LOC107601919,LOC107737285,LOC107597457 | coding | upstream | 1556 | 48746900 ~ 48851645 (-) |
| bach2 | bach2 | coding | upstream | 164208 | 48909552 ~ 49075894 (-) |
| map3k7 | map3k7 | coding | upstream | 374618 | 49119962 ~ 49147483 (-) |
| LOC111191920 | NA | coding | upstream | 689568 | 49434912 ~ 49435653 (-) |
| epha7 | epha7 | coding | upstream | 1062750 | 49808094 ~ 49941006 (-) |
| G27035 | LOC108427529 | non-coding | downstream | 50637 | 48586047 ~ 48694424 (-) |
| G27062 | NA | non-coding | downstream | 68221 | 48675753 ~ 48676840 (-) |
| G27046 | NA | non-coding | downstream | 110224 | 48634448 ~ 48634837 (-) |
| G27030 | NA | non-coding | downstream | 191901 | 48552832 ~ 48553160 (-) |
| G27029 | NA | non-coding | downstream | 192499 | 48552236 ~ 48552562 (-) |
| G27136 | NA | non-coding | upstream | 109321 | 48854665 ~ 48872464 (-) |
| G27139 | NA | non-coding | upstream | 113131 | 48858475 ~ 48877479 (-) |
| G27201 | NA | non-coding | upstream | 282827 | 49028171 ~ 49029684 (-) |
| G27219 | NA | non-coding | upstream | 476442 | 49221786 ~ 49224322 (-) |
| G27228 | NA | non-coding | upstream | 572108 | 49317452 ~ 49321378 (-) |
| LOC103039734 | LOC108424428 | other | downstream | 420399 | 48217506 ~ 48324662 (-) |
| pln | NA | other | downstream | 456325 | 48278262 ~ 48288736 (-) |
| G26754 | NA | other | downstream | 2006325 | 46704347 ~ 46738736 (-) |
| fkbp3 | fkbp3 | other | downstream | 2209226 | 46533695 ~ 46535835 (-) |
| G26695 | prpf39,LOC107729032 | other | downstream | 2219065 | 46518871 ~ 46525996 (-) |
| G27145 | NA | other | upstream | 141650 | 48886994 ~ 48891028 (-) |
| G27258 | NA | other | upstream | 893415 | 49638759 ~ 49639444 (-) |
| G27400 | NA | other | upstream | 1736545 | 50481889 ~ 50531639 (-) |
| LOC103034285 | NA | other | upstream | 1777555 | 50522899 ~ 50539672 (-) |
| pcmt1 | pcmt1 | other | upstream | 1979719 | 50725063 ~ 50740434 (-) |
