Gene
RNA
| Item | Value |
|---|---|
| gene id | G27225 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035899.1 |
| NCBI id | CM008302.1 |
| chromosome length | 74127438 |
| location | 49317462 ~ 49321378 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU36593 | True | 404 | lncRNA | 0.52 | 2 | 49317462 | 49321378 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| gja10 | gja10 | coding | upstream | 417228 | 48897216 ~ 48900234 (+) |
| casp8ap2 | NA | coding | upstream | 421483 | 48884002 ~ 48895979 (+) |
| ginm1 | ginm1 | coding | upstream | 594552 | 48711573 ~ 48722910 (+) |
| LOC103042815 | NA | coding | upstream | 609513 | 48699613 ~ 48707949 (+) |
| LOC103034613 | NA | coding | upstream | 622970 | 48690124 ~ 48694492 (+) |
| LOC111191919 | NA | coding | downstream | 43 | 49321421 ~ 49333922 (+) |
| ctgf | ctgf,ctgfa,LOC107683930,LOC107737382,LOC107737295,LOC107593869,LOC107556147 | coding | downstream | 1191575 | 50512953 ~ 50515944 (+) |
| lrp11 | lrp11 | coding | downstream | 1384871 | 50706249 ~ 50723932 (+) |
| lats1 | lats1,LOC107660506 | coding | downstream | 1436647 | 50758025 ~ 50768239 (+) |
| ube2j1 | ube2j1 | coding | downstream | 1574983 | 50896361 ~ 50972664 (+) |
| G27224 | NA | non-coding | upstream | 48836 | 49268369 ~ 49268626 (+) |
| G27164 | NA | non-coding | upstream | 195726 | 49118628 ~ 49121736 (+) |
| G27150 | NA | non-coding | upstream | 410914 | 48904656 ~ 48906548 (+) |
| G27130 | NA | non-coding | upstream | 443246 | 48854512 ~ 48874216 (+) |
| G27099 | NA | non-coding | upstream | 551517 | 48765489 ~ 48765945 (+) |
| G27248 | NA | non-coding | downstream | 307156 | 49628534 ~ 49628797 (+) |
| G27251 | NA | non-coding | downstream | 313478 | 49634856 ~ 49635084 (+) |
| G27263 | NA | non-coding | downstream | 441605 | 49762983 ~ 49763258 (+) |
| G27264 | NA | non-coding | downstream | 441940 | 49763318 ~ 49763743 (+) |
| G27268 | NA | non-coding | downstream | 482050 | 49803428 ~ 49804506 (+) |
| G27075 | NA | other | upstream | 575023 | 48741214 ~ 48742439 (+) |
| G26995 | NA | other | upstream | 675557 | 48555797 ~ 48641905 (+) |
| LOC103035773 | NA | other | upstream | 699387 | 48578803 ~ 48618075 (+) |
| G26915 | NA | other | upstream | 1001568 | 48278267 ~ 48315894 (+) |
| fau | fau,LOC108411505,LOC107704371 | other | upstream | 2767909 | 46528368 ~ 46549553 (+) |
| G27238 | LOC107747660 | other | downstream | 126467 | 49447845 ~ 49448221 (+) |
| moxd1 | moxd1,LOC107737327 | other | downstream | 1018186 | 50339564 ~ 50408570 (+) |
| nup43 | nup43 | other | downstream | 1423505 | 50744883 ~ 50753961 (+) |
| lyrm2 | lyrm2 | other | downstream | 1448485 | 50769863 ~ 50772162 (+) |
| G27489 | NA | other | downstream | 1853110 | 51174488 ~ 51178374 (+) |
