G59097


Basic Information

Item Value
gene id G59097
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 12288217 ~ 12289518 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU67286
AAAGGAGTAGATAGGAGCATTGTCCTTCATCCTGCTCTCTGAGTCACTGAAGAGAGACTCCCAGCTTCTGAAAACGACTTGATCCTTGAGGTTAACAATCGGTAATGTCTCTCTGTCGGATTTGCGGACGATACTGTAGAGATCCTGAAGTTTGGAAGACAGGAAGGCTCTGAATGTTCCCTTCAAACCCACGGCCCTAGCCTGCTGGAAGCACAGGAAGTCTGCCCCACGAATGCCTCTCATGTTCCCCACTTGTGGAGACGGAAGTATGGGTGTGGCCTTCTGGTTGATTGACAGGGGGGCTGGGACGGCGGGCTGGAGTGATAGGGTTCCTCTCAGGTTGAACAGGGTATCTGATTTCTGGTTGTACAGGATTGTACCTGCTATCAGTGTAGGGTGGGTATCGTGGATCTGGGTAACGGGAGTCAGGCGGATTGGGGTTTCTATTCTCTGGCTCACTCCTTGGAAACTCAATCGGCTGGTGCGGTGGAGAAATCTGCTCTGCTCCATTGTTAGCTGTGTGGTCCTGGGAATAGTGAACAACAGGGGGCGGCTGGACCGCTGCCACCT
>TU67287
CTAAGGACGACCCTGGTTGTTGCCATTTTATGAAAGCAATGGAGAAGCTGTGCTTTACAGTGATTTTATCATGGTTTTTACACTCTTTACCATGTTAAAATCAGTGTAATCTAATGGCTTGTTGCTTTGATAATCTGGAATGAAGTAACAGACTACACACCTTGAGGTTAACAATCGGTAATGTCTCTCTGTCGGATTTGCGGACGATACTGTAGAGATCCTGAAGTTTGGAAGACAGGAAGGCTCTGAATGTTCCCTTCAAACCCACGGCCCTAGCCTGCTGGAAGCACAGGAAGTCTGCCCCACGAATGCCTCTCATGTTCCCCACTTGTGGAGACGGAAGTATGGGTGTGGCCTTCTGGTTGATTGACAGGGGGGCTGGGACGGCGGGCTGGAGTGATAGGGTTCCTCTCAGGTTGAACAGGGTATCTGATTTCTGGTTGTACAGGATTGTACCTGCTATCAGTGTAGGGTGGGTATCGTGGATCTGGGTAACGGGAGTCAGGCGGATTGGGGTTTCTATTCTCTGGCTCACTCCTTGGAAACTCAATCGGCTGGTGCGGTGGAGAAATCTGCTCTGCTCCATTGTTAGCTGTGTGGTCCTGGGAATAGTGAACAACAGGGGGCGGCTGGACCGCTGCCACCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU67286 False 570 TUCP 0.53 3 12288217 12289518
TU67287 True 646 TUCP 0.50 2 12288217 12288977

Neighbor

gene id symbol gene type direction distance location
CI01000009_12176488_12184112 OBSL1 coding downstream 102557 12176154 ~ 12185660 (-)
CI01000009_12167744_12175422 NA coding downstream 112795 12167744 ~ 12175422 (-)
CI01000009_12152712_12167719 OBSL1B coding downstream 120498 12152465 ~ 12167719 (-)
CI01000009_12007202_12021667 MFSD6 coding downstream 266180 12006768 ~ 12022037 (-)
CI01000009_11947288_11963040 NAB1, NAB1B coding downstream 325177 11946457 ~ 11963040 (-)
CI01000009_12304891_12322499 NA coding upstream 15171 12304689 ~ 12322924 (-)
CI01000009_12486758_12498650 CALCRLA, CALCRL coding upstream 196108 12485626 ~ 12498650 (-)
CI01000009_12531562_12540003 NA coding upstream 241607 12531125 ~ 12540373 (-)
CI01000009_12643324_12643737 NA coding upstream 353743 12643261 ~ 12643988 (-)
CI01000009_12659018_12693857 COL5A2 coding upstream 368845 12658363 ~ 12694684 (-)
G59100 NA non-coding downstream 10304 12276360 ~ 12277913 (-)
G59096 NA non-coding downstream 25052 12249307 ~ 12263165 (-)
G59099 NA non-coding downstream 45879 12201926 ~ 12242338 (-)
G59094 NA non-coding downstream 87825 12200030 ~ 12200392 (-)
G59090 NA non-coding downstream 90777 12197149 ~ 12197440 (-)
G59151 NA non-coding upstream 76468 12365986 ~ 12369074 (-)
G59184 NA non-coding upstream 84357 12373875 ~ 12374203 (-)
G59185 NA non-coding upstream 84808 12374326 ~ 12374805 (-)
G59186 NA non-coding upstream 85348 12374866 ~ 12375298 (-)
G59200 NA non-coding upstream 103729 12393247 ~ 12393532 (-)
CI01000009_08858198_08860555 NA other downstream 3427654 8856310 ~ 8860563 (-)
G55814 NA other downstream 3860205 8425821 ~ 8428012 (-)
G53515 NA other downstream 6782969 5502395 ~ 5505248 (-)
G52828 NA other downstream 8056748 4217420 ~ 4231469 (-)
CI01000009_03261739_03262843 NA other downstream 9026260 3261038 ~ 3262843 (-)
CI01000009_13975122_13976026 NA other upstream 1685870 13975099 ~ 13978614 (-)
G59490 NA other upstream 1744046 14033564 ~ 14037873 (-)
G59811 NA other upstream 2572879 14862397 ~ 14887464 (-)
G59941 NA other upstream 2842586 15132104 ~ 15132503 (-)
CI01000009_15318811_15390382 TNS1 other upstream 3086742 15318811 ~ 15390382 (-)

Expression


Co-expression Network