G27283


Basic Information

Item Value
gene id G27283
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 49765702 ~ 49765941 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU36656
ggtagtgctggacgatatggcaaaaaattatatcacgatatattccttaatttcggtcgatacgatataatttcgatatcgatataaactatataaaactatataaaatactttgaaggcctcagaaaaactgctaagaatccctgcaatggaaatctgtacactactgtctgaaatcttaaattgaagtctttaaagcctcctctcacaaaaaactgtataatactttataaataaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36656 True 240 lncRNA 0.41 1 49765702 49765941

Neighbor

gene id symbol gene type direction distance location
LOC111191920 NA coding downstream 330049 49434912 ~ 49435653 (-)
map3k7 map3k7 coding downstream 618219 49119962 ~ 49147483 (-)
bach2 bach2 coding downstream 689808 48909552 ~ 49075894 (-)
mdn1 mdn1,LOC107755265,LOC107601919,LOC107737285,LOC107597457 coding downstream 914057 48746900 ~ 48851645 (-)
katna1 katna1,LOC107755263,LOC107683938,LOC107665349,LOC107737259,LOC107597454 coding downstream 1030332 48723000 ~ 48735370 (-)
epha7 epha7 coding upstream 42153 49808094 ~ 49941006 (-)
LOC103033334 NA coding upstream 807819 50573760 ~ 50580682 (-)
map3k5 map3k5,LOC107653159,LOC107660504 coding upstream 816406 50582347 ~ 50703118 (-)
ankrd6 ankrd6 coding upstream 1013393 50779334 ~ 50855315 (-)
pm20d2 pm20d2 coding upstream 1383522 51149463 ~ 51174390 (-)
G27262 NA non-coding downstream 7872 49757631 ~ 49757830 (-)
G27240 NA non-coding downstream 303786 49461497 ~ 49461916 (-)
G27237 NA non-coding downstream 331863 49432675 ~ 49433839 (-)
G27234 NA non-coding downstream 371882 49389851 ~ 49393820 (-)
G27228 NA non-coding downstream 444324 49317452 ~ 49321378 (-)
G27278 NA non-coding upstream 37342 49803283 ~ 49804689 (-)
G27279 NA non-coding upstream 39023 49804964 ~ 49807298 (-)
G27301 NA non-coding upstream 355257 50121198 ~ 50122158 (-)
G27302 NA non-coding upstream 357598 50123539 ~ 50125491 (-)
G27303 NA non-coding upstream 358318 50124259 ~ 50125807 (-)
G27258 NA other downstream 126258 49638759 ~ 49639444 (-)
G27145 NA other downstream 874674 48886994 ~ 48891028 (-)
LOC103039734 LOC108424428 other downstream 1441040 48217506 ~ 48324662 (-)
pln NA other downstream 1476966 48278262 ~ 48288736 (-)
G26754 NA other downstream 3026966 46704347 ~ 46738736 (-)
G27400 NA other upstream 715948 50481889 ~ 50531639 (-)
LOC103034285 NA other upstream 756958 50522899 ~ 50539672 (-)
pcmt1 pcmt1 other upstream 959122 50725063 ~ 50740434 (-)
LOC103040973 NA other upstream 2527939 52293880 ~ 52321920 (-)
G27821 LOC108413844,LOC108411774,LOC108411773,LOC108417426,LOC108417958 other upstream 3020531 52786472 ~ 52849906 (-)

Expression


Co-expression Network