Gene
RNA
| Item | Value |
|---|---|
| gene id | G27312 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035899.1 |
| NCBI id | CM008302.1 |
| chromosome length | 74127438 |
| location | 50287770 ~ 50287973 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU36690 | True | 204 | lncRNA | 0.39 | 1 | 50287770 | 50287973 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC111191919 | NA | coding | upstream | 953848 | 49321421 ~ 49333922 (+) |
| gja10 | gja10 | coding | upstream | 1387536 | 48897216 ~ 48900234 (+) |
| casp8ap2 | NA | coding | upstream | 1391791 | 48884002 ~ 48895979 (+) |
| ginm1 | ginm1 | coding | upstream | 1564860 | 48711573 ~ 48722910 (+) |
| LOC103042815 | NA | coding | upstream | 1579821 | 48699613 ~ 48707949 (+) |
| ctgf | ctgf,ctgfa,LOC107683930,LOC107737382,LOC107737295,LOC107593869,LOC107556147 | coding | downstream | 224980 | 50512953 ~ 50515944 (+) |
| lrp11 | lrp11 | coding | downstream | 418276 | 50706249 ~ 50723932 (+) |
| lats1 | lats1,LOC107660506 | coding | downstream | 470052 | 50758025 ~ 50768239 (+) |
| ube2j1 | ube2j1 | coding | downstream | 608388 | 50896361 ~ 50972664 (+) |
| LOC103030377 | LOC108427479,LOC108256881 | coding | downstream | 692542 | 50980515 ~ 51030792 (+) |
| G27309 | NA | non-coding | upstream | 11263 | 50276299 ~ 50276507 (+) |
| G27268 | NA | non-coding | upstream | 483264 | 49803428 ~ 49804506 (+) |
| G27264 | NA | non-coding | upstream | 524027 | 49763318 ~ 49763743 (+) |
| G27263 | NA | non-coding | upstream | 524512 | 49762983 ~ 49763258 (+) |
| G27251 | NA | non-coding | upstream | 652686 | 49634856 ~ 49635084 (+) |
| G27313 | NA | non-coding | downstream | 23560 | 50311533 ~ 50311766 (+) |
| G27322 | NA | non-coding | downstream | 74761 | 50362734 ~ 50418780 (+) |
| G27318 | NA | non-coding | downstream | 121063 | 50409036 ~ 50410284 (+) |
| G27333 | NA | non-coding | downstream | 258635 | 50546608 ~ 50549982 (+) |
| G27369 | NA | non-coding | downstream | 386584 | 50674557 ~ 50675496 (+) |
| G27238 | LOC107747660 | other | upstream | 839549 | 49447845 ~ 49448221 (+) |
| G27075 | NA | other | upstream | 1545331 | 48741214 ~ 48742439 (+) |
| G26995 | NA | other | upstream | 1645865 | 48555797 ~ 48641905 (+) |
| LOC103035773 | NA | other | upstream | 1669695 | 48578803 ~ 48618075 (+) |
| G26915 | NA | other | upstream | 1971876 | 48278267 ~ 48315894 (+) |
| moxd1 | moxd1,LOC107737327 | other | downstream | 51591 | 50339564 ~ 50408570 (+) |
| nup43 | nup43 | other | downstream | 456910 | 50744883 ~ 50753961 (+) |
| lyrm2 | lyrm2 | other | downstream | 481890 | 50769863 ~ 50772162 (+) |
| G27489 | NA | other | downstream | 886515 | 51174488 ~ 51178374 (+) |
| dsel | dsel,LOC108411752,LOC105896186,LOC106590194 | other | downstream | 1795309 | 52083282 ~ 52090633 (+) |
