Gene
RNA
| Item | Value |
|---|---|
| gene id | G27369 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035899.1 |
| NCBI id | CM008302.1 |
| chromosome length | 74127438 |
| location | 50674557 ~ 50675496 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU36751 | True | 511 | lncRNA | 0.47 | 2 | 50674557 | 50675496 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ctgf | ctgf,ctgfa,LOC107683930,LOC107737382,LOC107737295,LOC107593869,LOC107556147 | coding | upstream | 158613 | 50512953 ~ 50515944 (+) |
| LOC111191919 | NA | coding | upstream | 1340635 | 49321421 ~ 49333922 (+) |
| gja10 | gja10 | coding | upstream | 1774323 | 48897216 ~ 48900234 (+) |
| casp8ap2 | NA | coding | upstream | 1778578 | 48884002 ~ 48895979 (+) |
| ginm1 | ginm1 | coding | upstream | 1951647 | 48711573 ~ 48722910 (+) |
| lrp11 | lrp11 | coding | downstream | 30753 | 50706249 ~ 50723932 (+) |
| lats1 | lats1,LOC107660506 | coding | downstream | 82529 | 50758025 ~ 50768239 (+) |
| ube2j1 | ube2j1 | coding | downstream | 220865 | 50896361 ~ 50972664 (+) |
| LOC103030377 | LOC108427479,LOC108256881 | coding | downstream | 305019 | 50980515 ~ 51030792 (+) |
| gabrr1 | LOC108427508,LOC108256869,LOC102218978,LOC103457991,LOC103150855,LOC107392250,LOC108423527 | coding | downstream | 408572 | 51084068 ~ 51145395 (+) |
| G27333 | NA | non-coding | upstream | 124575 | 50546608 ~ 50549982 (+) |
| G27322 | NA | non-coding | upstream | 255777 | 50362734 ~ 50418780 (+) |
| G27318 | NA | non-coding | upstream | 264273 | 50409036 ~ 50410284 (+) |
| G27313 | NA | non-coding | upstream | 362791 | 50311533 ~ 50311766 (+) |
| G27312 | NA | non-coding | upstream | 386584 | 50287770 ~ 50287973 (+) |
| G27370 | NA | non-coding | downstream | 26875 | 50702371 ~ 50703121 (+) |
| G27463 | NA | non-coding | downstream | 297441 | 50972937 ~ 50973244 (+) |
| G27481 | NA | non-coding | downstream | 487129 | 51162625 ~ 51167564 (+) |
| G27491 | NA | non-coding | downstream | 512367 | 51187863 ~ 51188330 (+) |
| G27494 | NA | non-coding | downstream | 551596 | 51227092 ~ 51227330 (+) |
| moxd1 | moxd1,LOC107737327 | other | upstream | 265987 | 50339564 ~ 50408570 (+) |
| G27238 | LOC107747660 | other | upstream | 1226336 | 49447845 ~ 49448221 (+) |
| G27075 | NA | other | upstream | 1932118 | 48741214 ~ 48742439 (+) |
| G26995 | NA | other | upstream | 2032652 | 48555797 ~ 48641905 (+) |
| nup43 | nup43 | other | downstream | 69387 | 50744883 ~ 50753961 (+) |
| lyrm2 | lyrm2 | other | downstream | 94367 | 50769863 ~ 50772162 (+) |
| G27489 | NA | other | downstream | 498992 | 51174488 ~ 51178374 (+) |
| dsel | dsel,LOC108411752,LOC105896186,LOC106590194 | other | downstream | 1407786 | 52083282 ~ 52090633 (+) |
| G27683 | LOC108412685 | other | downstream | 1638529 | 52314025 ~ 52314266 (+) |
