G27903


Basic Information

Item Value
gene id G27903
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 53499475 ~ 53504424 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU37446
gacccaggcagagagacgaggaggcggacgtaatcAAAGGTAAGGTgagaattttaataaacaaagagacaagtaaacacgtaacaacaaaataactaaacaaacgagggaggctagagaacataaaactaaacaaacaagaggtactagtgataaacaagaaacaaacgctggaaaaataaactaggaataaacaagagagagagactaatgataaataaacaaggaggctataaaactagacaggatgaacttaaacagggcaagggaataaactaggga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU37446 True 282 lncRNA 0.37 2 53499475 53504424

Neighbor

gene id symbol gene type direction distance location
LOC103041583 LOC108417958 coding upstream 670191 52825184 ~ 52829284 (+)
LOC111188773 LOC108417958 coding upstream 682981 52811053 ~ 52816494 (+)
LOC103033541 LOC108413844,LOC108417958 coding upstream 710106 52785659 ~ 52789369 (+)
LOC111188745 NA coding upstream 717611 52769242 ~ 52781864 (+)
LOC103032675 kcnk10a,LOC103032675,LOC108413877,LOC107664828,LOC107582110,LOC107740298,LOC107747370,LOC107668129,LOC105017581 coding upstream 889654 52574938 ~ 52609821 (+)
epb41l2 epb41l2,LOC107560489,LOC106571359,LOC100380760 coding downstream 459138 53963562 ~ 54049416 (+)
scara5 scara5,LOC104952888 coding downstream 762960 54267384 ~ 54399891 (+)
LOC103031746 NA coding downstream 929299 54433723 ~ 54455524 (+)
LOC103038902 gopc,LOC107743304,LOC107727658,LOC107697149 coding downstream 1160984 54665408 ~ 54689752 (+)
tdrd15 NA coding downstream 1323200 54827624 ~ 54843995 (+)
G27875 NA non-coding upstream 168698 53327872 ~ 53330777 (+)
G27873 NA non-coding upstream 195070 53303928 ~ 53304405 (+)
G27849 NA non-coding upstream 469465 53029809 ~ 53030010 (+)
G27834 NA non-coding upstream 594797 52904320 ~ 52904678 (+)
G27772 NA non-coding upstream 806119 52603946 ~ 52693356 (+)
G27917 NA non-coding downstream 30176 53534600 ~ 53535225 (+)
G27923 NA non-coding downstream 72352 53576776 ~ 53577198 (+)
G27935 NA non-coding downstream 109353 53613777 ~ 53614007 (+)
G27962 NA non-coding downstream 170164 53674588 ~ 53675007 (+)
G27964 NA non-coding downstream 183275 53687699 ~ 53689734 (+)
LOC111188765 glrx5,LOC106571612 other upstream 730499 52760113 ~ 52768976 (+)
G27729 LOC103457336,LOC100194557,LOC103359577 other upstream 1043311 52454431 ~ 52456164 (+)
G27683 LOC108412685 other upstream 1185209 52314025 ~ 52314266 (+)
dsel dsel,LOC108411752,LOC105896186,LOC106590194 other upstream 1408842 52083282 ~ 52090633 (+)
G27489 NA other upstream 2321101 51174488 ~ 51178374 (+)
trnah-gug NA other downstream 118399 53622823 ~ 53622894 (+)
trnae-uuc_2 NA other downstream 118758 53623182 ~ 53623253 (+)
trnar-acg NA other downstream 119025 53623449 ~ 53623521 (+)
trnam-cau_5 NA other downstream 119193 53623617 ~ 53623689 (+)
trnah-gug_1 NA other downstream 119644 53624068 ~ 53624139 (+)

Expression


Co-expression Network