G29003


Basic Information

Item Value
gene id G29003
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 57911326 ~ 57911593 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU38941
ttccacctcactctaaccacttctgttctcgcgggtcccgtcagaatatcttgcgcgcgggacagaactgaactgttattggctggagcgggagtttaatccagacgatgcgggagcaaattaataaatagttaagaaaactgtaataattgtaaaaaaaaaaaaaacctaaagaaaactctcaacgcgcaggatggaccgacacacacacgcacacaccgatggtgtttggactggggtaaggaacgggaccgcactattcagcgct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU38941 True 268 lncRNA 0.34 1 57911326 57911593

Neighbor

gene id symbol gene type direction distance location
LOC103047227 NA coding upstream 21503 57878155 ~ 57889823 (+)
LOC103041704 LOC108424533 coding upstream 35934 57859082 ~ 57875392 (+)
LOC103042834 NA coding upstream 56203 57848467 ~ 57855123 (+)
LOC103043365 LOC108424527,LOC107569893,LOC107711660,LOC107665408,LOC107602225,LOC107721267 coding upstream 110455 57795392 ~ 57800871 (+)
LOC103047529 NA coding upstream 123291 57778205 ~ 57788035 (+)
LOC103041400 si:dkey-85n7.6,LOC103041400,LOC108424448,LOC107659191,LOC107602279 coding downstream 9142 57920735 ~ 57968882 (+)
LOC103040480 btbd7,LOC108411319,LOC107721332,LOC107659192,LOC107583814,LOC107711654,LOC107665372,LOC107602295 coding downstream 91654 58003247 ~ 58051793 (+)
LOC103038833 NA coding downstream 166895 58078488 ~ 58080709 (+)
LOC103039449 itpk1,LOC108257830 coding downstream 174916 58086509 ~ 58135453 (+)
LOC103036000 NA coding downstream 336188 58247781 ~ 58261441 (+)
G28955 NA non-coding upstream 120375 57790251 ~ 57790951 (+)
G28872 NA non-coding upstream 395021 57450210 ~ 57516305 (+)
G28864 NA non-coding upstream 513105 57397948 ~ 57398221 (+)
G28833 NA non-coding upstream 792603 57118496 ~ 57118723 (+)
G28822 NA non-coding upstream 900607 57010477 ~ 57010719 (+)
G29029 LOC108411326,LOC107721373,LOC108257828,LOC107659193 non-coding downstream 149332 58060925 ~ 58076530 (+)
G29036 NA non-coding downstream 204392 58115985 ~ 58119141 (+)
G29040 NA non-coding downstream 216269 58127862 ~ 58128360 (+)
G29033 NA non-coding downstream 231280 58142873 ~ 58144817 (+)
G29071 NA non-coding downstream 351605 58263198 ~ 58263581 (+)
LOC103042006 NA other upstream 98838 57802891 ~ 57812488 (+)
G28865 NA other upstream 508934 57401925 ~ 57402392 (+)
dcaf4 dcaf4,LOC107602090,LOC107659175,LOC107562700 other upstream 1205234 56695844 ~ 56706092 (+)
sipa1l1 sipa1l1,LOC107721317,LOC107668228,LOC107756605,LOC107659170,LOC106932450,LOC102236503,LOC106960899,LOC103130950,LOC103457354,LOC107081118 other upstream 1457392 56337156 ~ 56453934 (+)
LOC103033217 rab15,LOC107668202,LOC107671782,LOC103457353,LOC106608154,LOC106571087,LOC104949855 other upstream 1599215 56290747 ~ 56312111 (+)
G29155 foxq1 other downstream 505801 58417394 ~ 58418817 (+)
mtmr9 mtmr9,LOC107746110,LOC107701508,LOC107723304 other downstream 1152880 59064473 ~ 59112315 (+)
G29382 NA other downstream 1308939 59220532 ~ 59221036 (+)
LOC111194375 NA other downstream 1309673 59221266 ~ 59228840 (+)
atraid atraid other downstream 1642692 59554285 ~ 59559762 (+)

Expression


Co-expression Network