G29033


Basic Information

Item Value
gene id G29033
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 58142873 ~ 58144817 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU38977
ttcctcctcctcctcctcctcagattTGGAACGCTTCTCCTCTTCGTCCTCATTATCCCCTTTCTTCTTCATCACGCCTCGTTTGTGCTCTTGTTCCTCCTTCATGatgtcctcttcctcctcttccccaTTCCTCTTCTCCTGGCTGGAGATTTCATTGCGCTCATGCATCTTCTGCTCTTCCTCTTTACTCTCTTGTTCACTGTCCTCCTCTTcacctctcttcttcttctcttctttctcttctcctgGCCTCTCCATGGCAACCAGCATTGACCAATCTGCAGTCTTTTCTGTCCCCTCAGGGTGGTTGCTTACATGATCAACAGCATCCTTCATTCGCTTCTCCGGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU38977 True 353 lncRNA 0.31 2 58142873 58144817

Neighbor

gene id symbol gene type direction distance location
LOC103039449 itpk1,LOC108257830 coding upstream 7420 58086509 ~ 58135453 (+)
LOC103038833 NA coding upstream 62164 58078488 ~ 58080709 (+)
LOC103040480 btbd7,LOC108411319,LOC107721332,LOC107659192,LOC107583814,LOC107711654,LOC107665372,LOC107602295 coding upstream 91080 58003247 ~ 58051793 (+)
LOC103041400 si:dkey-85n7.6,LOC103041400,LOC108424448,LOC107659191,LOC107602279 coding upstream 173991 57920735 ~ 57968882 (+)
LOC103047227 NA coding upstream 253050 57878155 ~ 57889823 (+)
LOC103036000 NA coding downstream 102964 58247781 ~ 58261441 (+)
LOC103034955 LOC108257896,LOC106584199 coding downstream 137773 58282590 ~ 58317479 (+)
gmds gmds,LOC107711642,LOC107721371 coding downstream 176218 58321035 ~ 58385520 (+)
exoc2 exoc2,LOC107721345,LOC107659211,LOC107711641,LOC107665386 coding downstream 313137 58457954 ~ 58480787 (+)
LOC103031977 NA coding downstream 359985 58504802 ~ 58508475 (+)
G29040 NA non-coding upstream 14513 58127862 ~ 58128360 (+)
G29036 NA non-coding upstream 23732 58115985 ~ 58119141 (+)
G29029 LOC108411326,LOC107721373,LOC108257828,LOC107659193 non-coding upstream 66343 58060925 ~ 58076530 (+)
G29003 NA non-coding upstream 231280 57911326 ~ 57911593 (+)
G28955 NA non-coding upstream 351922 57790251 ~ 57790951 (+)
G29071 NA non-coding downstream 118381 58263198 ~ 58263581 (+)
G29150 NA non-coding downstream 252851 58397668 ~ 58398075 (+)
G29152 NA non-coding downstream 259536 58404353 ~ 58404651 (+)
G29156 NA non-coding downstream 302087 58446904 ~ 58447361 (+)
G29157 LOC106581475 non-coding downstream 303552 58448369 ~ 58448640 (+)
LOC103042006 NA other upstream 330385 57802891 ~ 57812488 (+)
G28865 NA other upstream 740481 57401925 ~ 57402392 (+)
dcaf4 dcaf4,LOC107602090,LOC107659175,LOC107562700 other upstream 1436781 56695844 ~ 56706092 (+)
sipa1l1 sipa1l1,LOC107721317,LOC107668228,LOC107756605,LOC107659170,LOC106932450,LOC102236503,LOC106960899,LOC103130950,LOC103457354,LOC107081118 other upstream 1688939 56337156 ~ 56453934 (+)
LOC103033217 rab15,LOC107668202,LOC107671782,LOC103457353,LOC106608154,LOC106571087,LOC104949855 other upstream 1830762 56290747 ~ 56312111 (+)
G29155 foxq1 other downstream 272577 58417394 ~ 58418817 (+)
mtmr9 mtmr9,LOC107746110,LOC107701508,LOC107723304 other downstream 919656 59064473 ~ 59112315 (+)
G29382 NA other downstream 1075715 59220532 ~ 59221036 (+)
LOC111194375 NA other downstream 1076449 59221266 ~ 59228840 (+)
atraid atraid other downstream 1409468 59554285 ~ 59559762 (+)

Expression


Co-expression Network