G29036


Basic Information

Item Value
gene id G29036
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 58115985 ~ 58119141 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU38980
taatatttagaCCCAGTTTCTTGGCTCTGGGTTATAATATGTGTACTTTAGTCAAGTGTGCCCCCCCACTGGTCACTGGTGATCTTCCAACAGGATTTCATTTCAAGGTTTAAGATTAAGGTTTATTGTAGTGATGTGAACAGTAAACAGGCAGTTACACTGTACAATAAAATTCTTTCTTTACTAGTCCTCCACTAACTCACTACTGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU38980 True 210 lncRNA 0.38 2 58115985 58119141

Neighbor

gene id symbol gene type direction distance location
LOC103038833 NA coding upstream 35276 58078488 ~ 58080709 (+)
LOC103040480 btbd7,LOC108411319,LOC107721332,LOC107659192,LOC107583814,LOC107711654,LOC107665372,LOC107602295 coding upstream 64192 58003247 ~ 58051793 (+)
LOC103041400 si:dkey-85n7.6,LOC103041400,LOC108424448,LOC107659191,LOC107602279 coding upstream 147103 57920735 ~ 57968882 (+)
LOC103047227 NA coding upstream 226162 57878155 ~ 57889823 (+)
LOC103041704 LOC108424533 coding upstream 240593 57859082 ~ 57875392 (+)
LOC103036000 NA coding downstream 128640 58247781 ~ 58261441 (+)
LOC103034955 LOC108257896,LOC106584199 coding downstream 163449 58282590 ~ 58317479 (+)
gmds gmds,LOC107711642,LOC107721371 coding downstream 201894 58321035 ~ 58385520 (+)
exoc2 exoc2,LOC107721345,LOC107659211,LOC107711641,LOC107665386 coding downstream 338813 58457954 ~ 58480787 (+)
LOC103031977 NA coding downstream 385661 58504802 ~ 58508475 (+)
G29029 LOC108411326,LOC107721373,LOC108257828,LOC107659193 non-coding upstream 39455 58060925 ~ 58076530 (+)
G29003 NA non-coding upstream 204392 57911326 ~ 57911593 (+)
G28955 NA non-coding upstream 325034 57790251 ~ 57790951 (+)
G28872 NA non-coding upstream 599680 57450210 ~ 57516305 (+)
G28864 NA non-coding upstream 717764 57397948 ~ 57398221 (+)
G29040 NA non-coding downstream 8721 58127862 ~ 58128360 (+)
G29033 NA non-coding downstream 23732 58142873 ~ 58144817 (+)
G29071 NA non-coding downstream 144057 58263198 ~ 58263581 (+)
G29150 NA non-coding downstream 278527 58397668 ~ 58398075 (+)
G29152 NA non-coding downstream 285212 58404353 ~ 58404651 (+)
LOC103042006 NA other upstream 303497 57802891 ~ 57812488 (+)
G28865 NA other upstream 713593 57401925 ~ 57402392 (+)
dcaf4 dcaf4,LOC107602090,LOC107659175,LOC107562700 other upstream 1409893 56695844 ~ 56706092 (+)
sipa1l1 sipa1l1,LOC107721317,LOC107668228,LOC107756605,LOC107659170,LOC106932450,LOC102236503,LOC106960899,LOC103130950,LOC103457354,LOC107081118 other upstream 1662051 56337156 ~ 56453934 (+)
LOC103033217 rab15,LOC107668202,LOC107671782,LOC103457353,LOC106608154,LOC106571087,LOC104949855 other upstream 1803874 56290747 ~ 56312111 (+)
G29155 foxq1 other downstream 298253 58417394 ~ 58418817 (+)
mtmr9 mtmr9,LOC107746110,LOC107701508,LOC107723304 other downstream 945332 59064473 ~ 59112315 (+)
G29382 NA other downstream 1101391 59220532 ~ 59221036 (+)
LOC111194375 NA other downstream 1102125 59221266 ~ 59228840 (+)
atraid atraid other downstream 1435144 59554285 ~ 59559762 (+)

Expression


Co-expression Network